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从真菌刺盘孢科的转录组中鉴定和描述真菌病毒。

Identification and characterization of mycoviruses in transcriptomes from the fungal family ceratocystidaceae.

机构信息

Forestry & Agricultural Biotechnology Institute (FABI), Department of Biochemistry, Genetics & Microbiology, University of Pretoria, Pretoria, South Africa.

出版信息

Virus Genes. 2024 Dec;60(6):696-710. doi: 10.1007/s11262-024-02112-4. Epub 2024 Oct 8.

Abstract

Mycoviruses pervade the fungal kingdom, yet their diversity within various fungal families and genera remains largely unexplored. In this study, 10 publicly available fungal transcriptomes from Ceratocystidaceae were analyzed for the presence of mycoviruses. Despite mycovirus associations being known in only four members of this family, our investigation unveiled the discovery of six novel mycoviruses. The majority of these mycoviruses are composed of positive sense single stranded RNA and are putatively assigned to the viral family Mitoviridae (with tentative classification into the genera Unuamitovirus and Duamitovirus). The double stranded RNA viruses, however, were associated with the family Totiviridae (with tentative classification into the genus Victorivirus). This study also revealed the discovery of an identical unuamitovirus in the fungal species Thielaviopsis ethacetica and Thielaviopsis paradoxa. This discovery was notable as these fungal isolates originated from distinct geographical locations, highlighting potential implications for the transmission of this mitovirus. Moreover, this investigation significantly expands the known host range for mycoviruses in this family, marking the initial identification of mycoviruses within Ceratocystis platani, Thielaviopsis paradoxa, Thielaviopsis ethacetica, and Huntiella omanensis. Future research should focus on determining the effects that these mycoviruses might have on their fungal hosts.

摘要

真菌病毒广泛存在于真菌界,但它们在各种真菌科和属中的多样性仍在很大程度上未被探索。在这项研究中,分析了 Ceratocystidaceae 科的 10 个公开可用的真菌转录组,以研究真菌病毒的存在情况。尽管该家族中只有四个成员已知与真菌病毒有关,但我们的调查揭示了六种新的真菌病毒的发现。这些真菌病毒大多数由正链单链 RNA 组成,并被推测属于真菌病毒科 Mitoviridae(暂定分类为 Unuamitovirus 和 Duamitovirus 属)。然而,双链 RNA 病毒与真菌病毒科 Totiviridae 有关(暂定分类为 Victorivirus 属)。这项研究还揭示了在真菌种 Thielaviopsis ethacetica 和 Thielaviopsis paradoxa 中发现了相同的 unuamitovirus。这一发现引人注目,因为这些真菌分离物来自不同的地理位置,这可能对这种 mitovirus 的传播产生潜在影响。此外,这项研究显著扩大了该科真菌病毒的已知宿主范围,标志着首次在 Ceratocystis platani、Thielaviopsis paradoxa、Thielaviopsis ethacetica 和 Huntiella omanensis 中鉴定出真菌病毒。未来的研究应集中于确定这些真菌病毒可能对其真菌宿主产生的影响。

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