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新型甲藻病毒——桐花藻病毒 1 的基因组和生物地理特征。

Genomic and biogeographic characterisation of the novel prasinovirus Mantoniella tinhauana virus 1.

机构信息

Department of Ocean Science, The Hong Kong University of Science and Technology, Hong Kong, Hong Kong SAR.

出版信息

Environ Microbiol Rep. 2024 Oct;16(5):e70020. doi: 10.1111/1758-2229.70020.

Abstract

Mamiellophyceae are a ubiquitous class of unicellular green algae in the global ocean. Their ecological importance is highlighted in studies focused on the prominent genera Micromonas, Ostreococcus, and Bathycoccus. Mamiellophyceae are susceptible to prasinoviruses, double-stranded DNA viruses belonging to the nucleocytoplasmic large DNA virus group. Our study represents the first isolation of a prasinovirus in the South China Sea and the only one to infect the globally distributed genus Mantoniella. We conducted a comparative analysis with previously identified viral relatives, encompassing morphological characteristics, host specificity, marker-based phylogenetic placement, and whole-genome sequence comparisons. Although it shares morphological and genetic similarities with established prasinoviruses, this novel virus showed distinct genetic traits, confining its infection to the species Mantoniella tinhauana. We also explored the global biogeography of this prasinovirus and its host by mapping metagenomic data and analysing their relationship with various environmental parameters. Our results demonstrate a pronounced link between the virus and its host, both found predominantly in higher latitudes in the surface ocean. By gaining an increased understanding of the relationships between viruses, hosts, and environments, researchers can better make predictions and potentially implement measures to mitigate the consequences of climate change on oceanic processes.

摘要

微囊藻目是全球海洋中普遍存在的一类单细胞绿藻。在以 Micromonas、Ostreococcus 和 Bathycoccus 等重要属为研究对象的研究中,它们的生态重要性得到了强调。微囊藻目易受绿藻朊病毒感染,绿藻朊病毒是一种属于核质大 DNA 病毒群的双链 DNA 病毒。我们的研究代表了在南海首次分离到绿藻朊病毒,也是唯一感染全球分布的 Mantoniella 属的病毒。我们对先前鉴定的病毒亲属进行了比较分析,包括形态特征、宿主特异性、基于标记的系统发育定位和全基因组序列比较。尽管该病毒与已建立的绿藻朊病毒在形态和遗传上具有相似性,但它表现出独特的遗传特征,仅感染 Mantoniella tinhauana 物种。我们还通过绘制宏基因组数据并分析其与各种环境参数的关系,探讨了这种绿藻朊病毒及其宿主的全球生物地理学。我们的研究结果表明,病毒与其宿主之间存在显著关联,两者都主要存在于海洋表面的高纬度地区。通过增加对病毒、宿主和环境之间关系的了解,研究人员可以更好地预测并可能采取措施减轻气候变化对海洋过程的影响。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ca85/11467894/04ba297113b5/EMI4-16-e70020-g002.jpg

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