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SH3和多个锚蛋白重复结构域2表达升高与胶质瘤预后改善相关。

Elevated SH3 and Multiple Ankyrin Repeat Domains 2 Expression Correlates With Improved Glioma Prognosis.

作者信息

Li Wenlin, Shi Haiping, He Jimin

机构信息

Department of Neurosurgery, Suining Central Hospital, Suining, Sichuan, China.

出版信息

Int J Genomics. 2024 Oct 4;2024:6565925. doi: 10.1155/2024/6565925. eCollection 2024.

DOI:10.1155/2024/6565925
PMID:39397895
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11469935/
Abstract

This study investigates the prognostic significance of SH3 and multiple ankyrin repeat domains 2 (SHANK2) gene expression in glioma patients, using data from The Cancer Genome Atlas (TCGA), the Genotype-Tissue Expression (GTEx) project, and the Gene Expression Omnibus (GEO). Through comprehensive analysis, we found a significant association between higher SHANK2 expression and improved survival outcomes across various glioma subtypes. To further validate the clinical relevance of SHANK2, we conducted cellular experiments involving siRNA-mediated knockdown of SHANK2 in U87 and A172 glioma cell lines. Quantitative real-time PCR (qPCR) and Western blot analyses confirmed the successful knockdown of SHANK2, and subsequent MTT assays revealed that silencing SHANK2 significantly promoted glioma cell proliferation. These findings underscore the potential role of SHANK2 as a tumor suppressor in glioma. The study also introduces a multivariate prognostic model incorporating SHANK2, providing a novel perspective on glioma prognosis. While the retrospective nature of the study presents limitations, our results suggest that SHANK2 expression could serve as a valuable biomarker for glioma prognosis and inform future therapeutic strategies.

摘要

本研究利用来自癌症基因组图谱(TCGA)、基因型-组织表达(GTEx)项目和基因表达综合数据库(GEO)的数据,调查了SH3和多个锚蛋白重复结构域2(SHANK2)基因表达在胶质瘤患者中的预后意义。通过综合分析,我们发现在各种胶质瘤亚型中,较高的SHANK2表达与改善的生存结果之间存在显著关联。为了进一步验证SHANK2的临床相关性,我们进行了细胞实验,在U87和A172胶质瘤细胞系中采用小干扰RNA(siRNA)介导的SHANK2敲低。定量实时聚合酶链反应(qPCR)和蛋白质免疫印迹分析证实了SHANK2的成功敲低,随后的MTT实验表明,沉默SHANK2显著促进了胶质瘤细胞的增殖。这些发现强调了SHANK2作为胶质瘤肿瘤抑制因子的潜在作用。该研究还引入了一个包含SHANK2的多变量预后模型,为胶质瘤预后提供了新的视角。虽然该研究的回顾性性质存在局限性,但我们的结果表明,SHANK2表达可作为胶质瘤预后的有价值生物标志物,并为未来的治疗策略提供参考。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/873d/11469935/ecae06b0ca81/IJG2024-6565925.006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/873d/11469935/efe0ba3044aa/IJG2024-6565925.001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/873d/11469935/b7159fa9a8f5/IJG2024-6565925.002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/873d/11469935/cce77b837015/IJG2024-6565925.003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/873d/11469935/a2aedd7b0d47/IJG2024-6565925.004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/873d/11469935/7064974fab94/IJG2024-6565925.005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/873d/11469935/ecae06b0ca81/IJG2024-6565925.006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/873d/11469935/efe0ba3044aa/IJG2024-6565925.001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/873d/11469935/b7159fa9a8f5/IJG2024-6565925.002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/873d/11469935/cce77b837015/IJG2024-6565925.003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/873d/11469935/a2aedd7b0d47/IJG2024-6565925.004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/873d/11469935/7064974fab94/IJG2024-6565925.005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/873d/11469935/ecae06b0ca81/IJG2024-6565925.006.jpg

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Virology. 2024 May;593:110033. doi: 10.1016/j.virol.2024.110033. Epub 2024 Feb 20.
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Efficient diagnosis of IDH-mutant gliomas: 1p/19qNET assesses 1p/19q codeletion status using weakly-supervised learning.异柠檬酸脱氢酶(IDH)突变型胶质瘤的高效诊断:1p/19qNET利用弱监督学习评估1p/19q共缺失状态。
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Structural deficits in key domains of Shank2 lead to alterations in postsynaptic nanoclusters and to a neurodevelopmental disorder in humans.
Shank2 关键结构域的结构性缺陷导致突触后纳米簇的改变,并导致人类神经发育障碍。
Mol Psychiatry. 2024 Jun;29(6):1683-1697. doi: 10.1038/s41380-022-01882-3. Epub 2022 Nov 30.
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Genetic Analysis Implicates Dysregulation of in Renal Cell Carcinoma Progression.遗传分析表明在肾细胞癌进展中存在的失调。
Int J Environ Res Public Health. 2022 Sep 30;19(19):12471. doi: 10.3390/ijerph191912471.
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