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提高2类CRISPR/Cas系统基因组编辑效率的策略。

Strategies for improving the genome-editing efficiency of class 2 CRISPR/Cas system.

作者信息

Wang Linli, Han Hongbing

机构信息

Frontiers Science Center for Molecular Design Breeding (MOE), China Agricultural University, Beijing, 100193, China.

Beijing Key Laboratory of Animal Genetic Improvement, College of Animal Science and Technology, China Agricultural University, Beijing, 100193, China.

出版信息

Heliyon. 2024 Sep 27;10(19):e38588. doi: 10.1016/j.heliyon.2024.e38588. eCollection 2024 Oct 15.

DOI:10.1016/j.heliyon.2024.e38588
PMID:39397905
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11471210/
Abstract

Since its advent, gene-editing technology has been widely used in microorganisms, animals, plants, and other species. This technology shows remarkable application prospects, giving rise to a new biotechnological industry. In particular, third-generation gene editing technology, represented by the CRISPR/Cas9 system, has become the mainstream gene editing technology owing to its advantages of high efficiency, simple operation, and low cost. These systems can be widely used because they have been modified and optimized, leading to notable improvements in the efficiency of gene editing. This review introduces the characteristics of popular CRISPR/Cas systems and optimization methods aimed at improving the editing efficiency of class 2 CRISPR/Cas systems, providing a reference for the development of superior gene editing systems. Additionally, the review discusses the development and optimization of base editors, primer editors, gene activation and repression tools, as well as the advancement and refinement of compact systems such as IscB, TnpB, Fanzor, and Cas12f.

摘要

自问世以来,基因编辑技术已在微生物、动物、植物及其他物种中得到广泛应用。该技术展现出显著的应用前景,催生出一个新的生物技术产业。特别是以CRISPR/Cas9系统为代表的第三代基因编辑技术,因其高效、操作简单、成本低等优势,已成为主流基因编辑技术。这些系统经过改造和优化,可广泛应用,基因编辑效率也有显著提高。本综述介绍了常用CRISPR/Cas系统的特点以及旨在提高2类CRISPR/Cas系统编辑效率的优化方法,为开发更优基因编辑系统提供参考。此外,本综述还讨论了碱基编辑器、引物编辑器、基因激活和抑制工具的发展与优化,以及IscB、TnpB、Fanzor和Cas12f等紧凑型系统的进展与完善。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2e06/11471210/7f768ae7002a/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2e06/11471210/294f8b67be54/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2e06/11471210/c20164cfdb87/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2e06/11471210/3e6081130a71/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2e06/11471210/7f768ae7002a/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2e06/11471210/294f8b67be54/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2e06/11471210/c20164cfdb87/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2e06/11471210/3e6081130a71/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2e06/11471210/7f768ae7002a/gr4.jpg

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本文引用的文献

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nCas9 Engineering for Improved Target Interaction Presents an Effective Strategy to Enhance Base Editing.nCas9 工程改良靶标相互作用为碱基编辑的增强提供了有效策略。
Adv Sci (Weinh). 2024 Aug;11(31):e2405426. doi: 10.1002/advs.202405426. Epub 2024 Jun 17.
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Engineering miniature CRISPR-Cas Un1Cas12f1 for efficient base editing.工程化微型CRISPR-Cas Un1Cas12f1用于高效碱基编辑。
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Discovery and structural mechanism of DNA endonucleases guided by RAGATH-18-derived RNAs.
通过人工智能和植物组学科学深入了解表观遗传记忆。
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CRISPR-Cas Systems: A Functional Perspective and Innovations.CRISPR-Cas系统:功能视角与创新
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Hypercompact TnpB and truncated TnpB systems enable efficient genome editing in vitro and in vivo.超紧凑型TnpB和截短型TnpB系统可在体外和体内实现高效的基因组编辑。
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Enhancing prime editor activity by directed protein evolution in yeast.通过在酵母中定向蛋白质进化来增强 Prime 编辑器的活性。
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Optimization of Nuclear Localization Signal Composition Improves CRISPR-Cas12a Editing Rates in Human Primary Cells.核定位信号组成的优化提高了人类原代细胞中的CRISPR-Cas12a编辑率。
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