Center for Quantitative Cell Imaging and Department of Botany, University of Wisconsin-Madison, Madison, WI 53706.
Institute of Science and Technology Austria, Klosterneuburg 3400, Austria.
Proc Natl Acad Sci U S A. 2024 Oct 29;121(44):e2409407121. doi: 10.1073/pnas.2409407121. Epub 2024 Oct 23.
Multivesicular endosomes (MVEs) sequester membrane proteins destined for degradation within intralumenal vesicles (ILVs), a process mediated by the membrane-remodeling action of Endosomal Sorting Complex Required for Transport (ESCRT) proteins. In , endosomal membrane constriction and scission are uncoupled, resulting in the formation of extensive concatenated ILV networks and enhancing cargo sequestration efficiency. Here, we used a combination of electron tomography, computer simulations, and mathematical modeling to address the questions of when concatenated ILV networks evolved in plants and what drives their formation. Through morphometric analyses of tomographic reconstructions of endosomes across yeast, algae, and various land plants, we have found that ILV concatenation is widespread within plant species, but only prevalent in seed plants, especially in flowering plants. Multiple budding sites that require the formation of pores in the limiting membrane were only identified in hornworts and seed plants, suggesting that this mechanism has evolved independently in both plant lineages. To identify the conditions under which these multiple budding sites can arise, we used particle-based molecular dynamics simulations and found that changes in ESCRT filament properties, such as filament curvature and membrane binding energy, can generate the membrane shapes observed in multiple budding sites. To understand the relationship between membrane budding activity and ILV network topology, we performed computational simulations and identified a set of membrane remodeling parameters that can recapitulate our tomographic datasets.
多泡体 (MVEs) 将注定要在腔内小泡 (ILVs) 中降解的膜蛋白隔离,这个过程是由内体分选复合物必需的运输 (ESCRT) 蛋白的膜重塑作用介导的。在 ,内体膜的收缩和分裂被解耦,导致广泛的串联 ILV 网络的形成,并提高货物隔离效率。在这里,我们使用电子断层扫描、计算机模拟和数学建模的组合来解决串联 ILV 网络在植物中何时进化以及是什么驱动它们形成的问题。通过对酵母、藻类和各种陆地植物的内体断层扫描重建进行形态计量分析,我们发现 ILV 串联在植物物种中广泛存在,但仅在种子植物中普遍存在,尤其是在开花植物中。仅在角苔和种子植物中鉴定到需要在限制膜中形成孔的多个出芽部位,这表明这种机制在这两个植物谱系中是独立进化的。为了确定这些多个出芽部位可以出现的条件,我们使用基于粒子的分子动力学模拟发现,ESCRT 丝的性质的变化,如丝的曲率和膜结合能,可以产生在多个出芽部位观察到的膜形状。为了了解膜出芽活性和 ILV 网络拓扑之间的关系,我们进行了计算模拟,并确定了一组可以再现我们断层扫描数据集的膜重塑参数。