• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

一种机器学习方法来确定流感和SARS-CoV-2感染重症患者呼吸道细菌/真菌合并感染的危险因素:西班牙视角

A Machine Learning Approach to Determine Risk Factors for Respiratory Bacterial/Fungal Coinfection in Critically Ill Patients with Influenza and SARS-CoV-2 Infection: A Spanish Perspective.

作者信息

Rodríguez Alejandro, Gómez Josep, Martín-Loeches Ignacio, Claverias Laura, Díaz Emili, Zaragoza Rafael, Borges-Sa Marcio, Gómez-Bertomeu Frederic, Franquet Álvaro, Trefler Sandra, González Garzón Carlos, Cortés Lissett, Alés Florencia, Sancho Susana, Solé-Violán Jordi, Estella Ángel, Berrueta Julen, García-Martínez Alejandro, Suberviola Borja, Guardiola Juan J, Bodí María

机构信息

Critical Care Department, Hospital Universitari Joan XXIII, 43005 Tarragona, Spain.

Faculty of Medicine, Universitat Rovira & Virgili, 43005 Tarragona, Spain.

出版信息

Antibiotics (Basel). 2024 Oct 14;13(10):968. doi: 10.3390/antibiotics13100968.

DOI:10.3390/antibiotics13100968
PMID:39452234
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11504409/
Abstract

: Bacterial/fungal coinfections (COIs) are associated with antibiotic overuse, poor outcomes such as prolonged ICU stay, and increased mortality. Our aim was to develop machine learning-based predictive models to identify respiratory bacterial or fungal coinfections upon ICU admission. : We conducted a secondary analysis of two prospective multicenter cohort studies with confirmed influenza A (H1N1)pdm09 and COVID-19. Multiple logistic regression (MLR) and random forest (RF) were used to identify factors associated with BFC in the overall population and in each subgroup (influenza and COVID-19). The performance of these models was assessed by the area under the ROC curve (AUC) and out-of-bag (OOB) methods for MLR and RF, respectively. : Of the 8902 patients, 41.6% had influenza and 58.4% had SARS-CoV-2 infection. The median age was 60 years, 66% were male, and the crude ICU mortality was 25%. BFC was observed in 14.2% of patients. Overall, the predictive models showed modest performances, with an AUC of 0.68 (MLR) and OOB 36.9% (RF). Specific models did not show improved performance. However, age, procalcitonin, CRP, APACHE II, SOFA, and shock were factors associated with BFC in most models. : Machine learning models do not adequately predict the presence of co-infection in critically ill patients with pandemic virus infection. However, the presence of factors such as advanced age, elevated procalcitonin or CPR, and high severity of illness should alert clinicians to the need to rule out this complication on admission to the ICU.

摘要

细菌/真菌合并感染(COIs)与抗生素过度使用、诸如延长重症监护病房(ICU)住院时间等不良预后以及死亡率增加相关。我们的目的是开发基于机器学习的预测模型,以在ICU入院时识别呼吸道细菌或真菌合并感染。

我们对两项确诊甲型H1N1流感大流行(pdm09)和新冠肺炎的前瞻性多中心队列研究进行了二次分析。采用多因素逻辑回归(MLR)和随机森林(RF)方法,在总体人群和各亚组(流感和新冠肺炎)中识别与细菌/真菌合并感染(BFC)相关的因素。分别采用ROC曲线下面积(AUC)和袋外(OOB)方法评估MLR和RF模型的性能。

在8902例患者中,41.6%患有流感,58.4%感染了严重急性呼吸综合征冠状病毒2(SARS-CoV-2)。中位年龄为60岁,66%为男性,ICU粗死亡率为25%。14.2%的患者观察到细菌/真菌合并感染。总体而言,预测模型表现一般,MLR的AUC为0.68,RF的OOB为36.9%。特定模型未显示出性能改善。然而,在大多数模型中,年龄、降钙素原、C反应蛋白(CRP)、急性生理与慢性健康状况评分系统II(APACHE II)、序贯器官衰竭评估(SOFA)和休克是与细菌/真菌合并感染相关的因素。

机器学习模型不能充分预测大流行病毒感染的危重症患者中合并感染的存在。然而,高龄、降钙素原或CRP升高以及疾病严重程度高等因素的存在应提醒临床医生在ICU入院时需要排除这种并发症。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/89af/11504409/b77994a945bc/antibiotics-13-00968-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/89af/11504409/3c829becad86/antibiotics-13-00968-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/89af/11504409/b77994a945bc/antibiotics-13-00968-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/89af/11504409/3c829becad86/antibiotics-13-00968-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/89af/11504409/b77994a945bc/antibiotics-13-00968-g002.jpg

相似文献

1
A Machine Learning Approach to Determine Risk Factors for Respiratory Bacterial/Fungal Coinfection in Critically Ill Patients with Influenza and SARS-CoV-2 Infection: A Spanish Perspective.一种机器学习方法来确定流感和SARS-CoV-2感染重症患者呼吸道细菌/真菌合并感染的危险因素:西班牙视角
Antibiotics (Basel). 2024 Oct 14;13(10):968. doi: 10.3390/antibiotics13100968.
2
Development and validation of machine learning-based models for predicting healthcare-associated bacterial/fungal infections among COVID-19 inpatients: a retrospective cohort study.基于机器学习的模型用于预测COVID-19住院患者医疗相关细菌/真菌感染的开发与验证:一项回顾性队列研究
Antimicrob Resist Infect Control. 2024 Apr 14;13(1):42. doi: 10.1186/s13756-024-01392-7.
3
Delay in diagnosis of influenza A (H1N1)pdm09 virus infection in critically ill patients and impact on clinical outcome.危重症患者甲型H1N1流感大流行病毒感染的诊断延迟及其对临床结局的影响。
Crit Care. 2016 Oct 23;20(1):337. doi: 10.1186/s13054-016-1512-1.
4
Negative predictive value of procalcitonin to rule out bacterial respiratory co-infection in critical covid-19 patients.降钙素原对排除危重症 COVID-19 患者细菌合并呼吸道感染的阴性预测值。
J Infect. 2022 Oct;85(4):374-381. doi: 10.1016/j.jinf.2022.06.024. Epub 2022 Jun 30.
5
Coinfection and superinfection in ICU critically ill patients with severe COVID-19 pneumonia and influenza pneumonia: are the pictures different?COVID-19 重症肺炎和流感肺炎 ICU 危重症患者的合并感染和再感染:两者的表现是否不同?
Front Public Health. 2023 Aug 29;11:1195048. doi: 10.3389/fpubh.2023.1195048. eCollection 2023.
6
Community-acquired respiratory coinfection in critically ill patients with pandemic 2009 influenza A(H1N1) virus.社区获得性呼吸道合并感染在重症 2009 年甲型流感病毒大流行患者。
Chest. 2011 Mar;139(3):555-562. doi: 10.1378/chest.10-1396. Epub 2010 Oct 7.
7
Procalcitonin and C-reactive protein to rule out early bacterial coinfection in COVID-19 critically ill patients.降钙素原和 C 反应蛋白在 COVID-19 危重症患者中排除早期细菌合并感染的作用。
Intensive Care Med. 2023 Aug;49(8):934-945. doi: 10.1007/s00134-023-07161-1. Epub 2023 Jul 28.
8
Bacterial co-infections in community-acquired pneumonia caused by SARS-CoV-2, influenza virus and respiratory syncytial virus.SARS-CoV-2、流感病毒和呼吸道合胞病毒引起的社区获得性肺炎中的细菌合并感染。
BMC Infect Dis. 2022 Jan 31;22(1):108. doi: 10.1186/s12879-022-07089-9.
9
Global Coinfections with Bacteria, Fungi, and Respiratory Viruses in Children with SARS-CoV-2: A Systematic Review and Meta-Analysis.2019冠状病毒病患儿的细菌、真菌和呼吸道病毒合并感染:一项系统评价和荟萃分析
Trop Med Infect Dis. 2022 Nov 15;7(11):380. doi: 10.3390/tropicalmed7110380.
10
Macrolide-based regimens in absence of bacterial co-infection in critically ill H1N1 patients with primary viral pneumonia.在原发性病毒性肺炎的危重症 H1N1 患者中,如果没有细菌合并感染,可使用大环内酯类药物方案。
Intensive Care Med. 2013 Apr;39(4):693-702. doi: 10.1007/s00134-013-2829-8. Epub 2013 Jan 24.

引用本文的文献

1
Advocating for the recognition of underlying immunosuppression in critical illness.倡导认识危重症中潜在的免疫抑制。
EClinicalMedicine. 2025 Jun 30;85:103300. doi: 10.1016/j.eclinm.2025.103300. eCollection 2025 Jul.
2
Does Empirical Antibiotic Use Improve Outcomes in Ventilated Patients with Pandemic Viral Infection? A Multicentre Retrospective Study.经验性使用抗生素能否改善大流行病毒感染通气患者的预后?一项多中心回顾性研究。
Antibiotics (Basel). 2025 Jun 8;14(6):594. doi: 10.3390/antibiotics14060594.

本文引用的文献

1
A prediction model for secondary invasive fungal infection among severe SARS-CoV-2 positive patients in ICU.一种重症 SARS-CoV-2 阳性患者 ICU 中继发侵袭性真菌感染的预测模型。
Front Cell Infect Microbiol. 2024 Jul 8;14:1382720. doi: 10.3389/fcimb.2024.1382720. eCollection 2024.
2
Risk factors and outcome of acute kidney injury in critically ill patients with SARS-CoV-2 pneumonia: a multicenter study.新型冠状病毒肺炎危重症患者急性肾损伤的危险因素及预后:一项多中心研究
Med Intensiva (Engl Ed). 2025 Jan;49(1):15-24. doi: 10.1016/j.medine.2024.06.022. Epub 2024 Jul 12.
3
Development and validation of machine learning-based models for predicting healthcare-associated bacterial/fungal infections among COVID-19 inpatients: a retrospective cohort study.
基于机器学习的模型用于预测COVID-19住院患者医疗相关细菌/真菌感染的开发与验证:一项回顾性队列研究
Antimicrob Resist Infect Control. 2024 Apr 14;13(1):42. doi: 10.1186/s13756-024-01392-7.
4
Difference in the impact of coinfections and secondary infections on antibiotic use in patients hospitalized with COVID-19 between the Omicron-dominant period and the pre-Omicron period.奥密克戎变异株主导期与奥密克戎变异株流行前期新冠病毒感染者住院期间合并感染和继发感染对抗生素使用影响的差异。
J Infect Chemother. 2024 Sep;30(9):853-859. doi: 10.1016/j.jiac.2024.02.026. Epub 2024 Feb 28.
5
Impact of COVID-19 on immunocompromised populations during the Omicron era: insights from the observational population-based INFORM study.奥密克戎时代新冠病毒病对免疫功能低下人群的影响:基于观察性人群的INFORM研究的见解
Lancet Reg Health Eur. 2023 Oct 13;35:100747. doi: 10.1016/j.lanepe.2023.100747. eCollection 2023 Dec.
6
Comparison of COVID-19 with influenza A in the ICU: a territory-wide, retrospective, propensity matched cohort on mortality and length of stay.比较 ICU 中 COVID-19 与甲型流感:一项全岛范围、回顾性、倾向评分匹配队列研究,评估死亡率和住院时间。
BMJ Open. 2023 Jul 10;13(7):e067101. doi: 10.1136/bmjopen-2022-067101.
7
A systematic review of the clinical characteristics of influenza-COVID-19 co-infection.一项关于流感-COVID-19 合并感染的临床特征的系统回顾。
Clin Exp Med. 2023 Nov;23(7):3265-3275. doi: 10.1007/s10238-023-01116-y. Epub 2023 Jun 16.
8
Epidemiology of bacterial co-infections and risk factors in COVID-19-hospitalized patients in Spain: a nationwide study.西班牙 COVID-19 住院患者细菌合并感染的流行病学和危险因素:一项全国性研究。
Eur J Public Health. 2023 Aug 1;33(4):675-681. doi: 10.1093/eurpub/ckad060.
9
Clinical outcomes of the severe acute respiratory syndrome coronavirus 2 Omicron and Delta variant: systematic review and meta-analysis of 33 studies covering 6 037 144 coronavirus disease 2019-positive patients.奥密克戎和德尔塔变异株导致的严重急性呼吸综合征冠状病毒 2 的临床结局:33 项研究的系统评价和荟萃分析,涵盖 6037144 例新型冠状病毒疾病 2019 阳性患者。
Clin Microbiol Infect. 2023 Jul;29(7):835-844. doi: 10.1016/j.cmi.2023.03.017. Epub 2023 Mar 18.
10
Incidence, risk factors and pre-emptive screening for COVID-19 associated pulmonary aspergillosis in an era of immunomodulant therapy.免疫调节剂治疗时代 COVID-19 相关肺曲霉病的发病率、危险因素和预防性筛查。
J Crit Care. 2023 Aug;76:154272. doi: 10.1016/j.jcrc.2023.154272. Epub 2023 Feb 16.