Key Laboratory of Cleaner Production and Integrated Resource Utilization of China National Light Industry, School of Light Industry, Beijing Technology and Business University, Beijing, PR China.
Int J Syst Evol Microbiol. 2024 Oct;74(10). doi: 10.1099/ijsem.0.006529.
Strain M09 was isolated from the rhizoshere of kiwi fruit trees from an orchard located in Fangshan, Beijing, PR China (39° 49' 25.1″ N, 116° 4' 44.5″ E,). It is a short rod-shaped, Gram-stain-negative, facultatively anaerobic bacterium that tests positive for both oxidase and catalase. The strain exhibited growth within the temperature range of 15-45 °C (optimal growth at 30 °C) and the pH range of 4.0-10.0 (optimal growth at pH 7.0) and without NaCl. It also grew in a sodium chloride-free nutrient agar (NA) medium. The results of phylogenetic analysis of the 16S rRNA gene sequences indicated that M09 represents a member of the genus and shares high similarity with S8-55 (98.46%) and 011410 (97.58%). The average nucleotide identity values between M09 and S8-55, 011410, X HP0099 and MVW-1 were 95.56, 84.51, 79.83 and 83.68%, respectively. The digital DNA-DNA hybridisation values between between M09 and S8-55, 011410, X HP0099 and MVW-1 were 56.40, 29.30, 21.60 and 28.60%, respectively. The major fatty acids identified were C 3-OH (51.8%) and Cω7 (35.5%). The major respiratory quinone was Q-10, with Q-8 present as a minor component. Polar lipids were mainly comprised of diphosphatidylglycerol (DPG), phosphatidylglycerol (PG), phosphatidylcholine (PC), and phosphatidylethanolamine (PE). Genome sequencing revealed that the strain has a DNA G+C content of 64.31 mol%. On the basis of this comprehensive taxonomic characterisation data, M09 represents a novel species within the genus and has been named sp. nov. The type strain is designated as M09 (=GDMCC 1.4157=KCTC 8143).
M09 菌株从中国北京房山区一个果园的猕猴桃根际中分离得到(39°49'25.1″N,116°4'44.5″E)。它是一个短的杆状、革兰氏阴性、兼性厌氧细菌,氧化酶和过氧化氢酶均为阳性。该菌株在 15-45°C 的温度范围内和 pH 值为 4.0-10.0 的范围内生长(最佳生长温度为 pH 7.0),并且不含 NaCl。它也可以在无氯化钠的营养琼脂(NA)培养基中生长。16S rRNA 基因序列的系统发育分析结果表明,M09 代表一个属的成员,与 S8-55(98.46%)和 011410(97.58%)高度相似。M09 与 S8-55、011410、X HP0099 和 MVW-1 的平均核苷酸同一性值分别为 95.56、84.51、79.83 和 83.68%。M09 与 S8-55、011410、X HP0099 和 MVW-1 之间的数字 DNA-DNA 杂交值分别为 56.40、29.30、21.60 和 28.60%。鉴定的主要脂肪酸为 C 3-OH(51.8%)和 Cω7(35.5%)。主要呼吸醌为 Q-10,Q-8 为次要成分。极性脂主要由二磷脂酰甘油(DPG)、磷脂酰甘油(PG)、磷脂酰胆碱(PC)和磷脂酰乙醇胺(PE)组成。基因组测序显示该菌株的 DNA G+C 含量为 64.31 mol%。基于这些全面的分类特征数据,M09 代表了属内的一个新种,并被命名为 sp. nov. 。该模式菌株被指定为 M09(=GDMCC 1.4157=KCTC 8143)。