College of Bioscience and Biotechnology, Shenyang Agricultural University, Shenyang 110866, China.
College of Land and Environment, Shenyang Agricultural University, Shenyang 110866, China.
Viruses. 2024 Oct 19;16(10):1631. doi: 10.3390/v16101631.
The current knowledge of phages is limited, with few genomes sequenced and characterized. In this study, a prophage, vB_G30_01, isolated from G30 was characterized and evaluated for its lysogenic host range. The phage was studied using transmission electron microscopy and a host range. The phage genome was sequenced and characterized in depth, including phylogenetic and taxonomic analyses. The linear dsDNA genome of vB_G30_01 contains 67 predicted open reading frames (ORFs), classifying it within Bronfenbrennervirinae. With a total of 10 ORFs involved in DNA replication-related and transcriptional regulator functions, vB_G30_01 may play a role in the genetics and transcription of a host. Additionally, vB_G30_01 possesses a complete set of genes related to host lysogeny and lysis, implying that vB_G30_01 may influence the survival and adaptation of its host. Furthermore, a comparative genomic analysis reveals that vB_G30_01 shares high genomic similarity with other phages and is relatively closely related to those of and , which, in combination with the cross-infection assay, suggests possible cross-species infection capabilities. This study enhances the understanding of prophages, providing insights into phage-host interactions and potential horizontal gene transfer.
目前人们对噬菌体的了解有限,只有少数基因组被测序和表征。本研究从 G30 中分离出一种潜伏噬菌体 vB_G30_01,并对其溶原宿主范围进行了表征和评估。该噬菌体通过透射电子显微镜和宿主范围进行了研究。深入研究了噬菌体基因组的测序和表征,包括系统发育和分类学分析。vB_G30_01 的线性 dsDNA 基因组包含 67 个预测的开放阅读框(ORF),将其归类为 Bronfenbrennervirinae 科。总共 10 个 ORF 参与 DNA 复制相关和转录调控功能,vB_G30_01 可能在宿主的遗传学和转录中发挥作用。此外,vB_G30_01 具有一套完整的与宿主溶原和裂解相关的基因,这表明 vB_G30_01 可能影响其宿主的生存和适应。此外,比较基因组分析表明,vB_G30_01 与其他噬菌体具有高度的基因组相似性,与 和 的噬菌体关系较为密切,这与交叉感染实验结果结合表明,其可能具有跨物种感染的能力。本研究增进了对噬菌体的了解,深入了解了噬菌体-宿主相互作用和潜在的水平基因转移。