School of Allied Health Sciences, Walailak University, Nakhon Si Thammarat, 80161, Thailand.
Research Excellence Center for Innovation and Health Products, Walailak University, Nakhon Si Thammarat, 80161, Thailand.
Sci Rep. 2024 Oct 28;14(1):25738. doi: 10.1038/s41598-024-75240-4.
G Protein-Coupled Receptors (GPCRs) are integral membrane proteins that have gained considerable attention as drug targets, particularly in cancer treatment. In this study, we explored the capacity of bioactive compounds derived from Gnetum gnemon (GG) for the development of of pharmaceuticals targeting GPCRs within the context of cancer therapy. Integrated approach combined network pharmacology and molecular docking to identify and validate the underlying pharmacological mechanisms. We retrieved targets for GG-derived compounds and GPCRs-related cancer from databases. Subsequently, we established a protein-protein interaction (PPI) network by mapping the shared targets. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analyses were employed to predict the mechanism of action of these targets. Molecular docking was conducted to validate our findings. We identified a total of 265 targets associated with GG-derived bioactive compounds for the treatment of GPCRs-related cancer. Functional enrichment analysis revealed the promising therapeutic effects of these targets on GPCRs-related cancer pathways. The PPI network analysis identified hub targets, including MAPK3, SRC, EGFR, STAT3, ESR1, MTOR, CCND1, and PPARG, which demonstrate as treatment targets for GPCRs-related cancer using GG-derived compounds. Additionally, molecular docking experiments demonstrated the strong binding affinity of gnetin A, gnetin C, (-)-viniferin, and resveratrol dimer, thus inhibiting MAPK3, SRC, EGFR, and MTOR. Survival analysis established the clinical prognostic relevance of identified hub genes in cancer. This study presents a novel approach for comprehending the therapeutic mechanisms of GG-derived active compounds and thereby paving the way for their prospective clinical applications in the field of cancer treatment.
G 蛋白偶联受体(GPCRs)是一种整合膜蛋白,作为药物靶点引起了广泛关注,特别是在癌症治疗方面。在这项研究中,我们探讨了来源于买麻藤(Gnetum gnemon,GG)的生物活性化合物在癌症治疗中开发针对 GPCRs 的药物的潜力。我们采用网络药理学和分子对接相结合的综合方法来识别和验证潜在的药理机制。我们从数据库中检索 GG 衍生化合物和 GPCRs 相关癌症的靶点。随后,我们通过映射共享靶点建立了蛋白质-蛋白质相互作用(PPI)网络。采用基因本体论(GO)和京都基因与基因组百科全书(KEGG)通路富集分析来预测这些靶点的作用机制。进行分子对接以验证我们的研究结果。我们共鉴定出 265 个与 GG 衍生生物活性化合物相关的靶点,用于治疗 GPCRs 相关癌症。功能富集分析揭示了这些靶点对 GPCRs 相关癌症通路的潜在治疗效果。PPI 网络分析确定了关键靶点,包括 MAPK3、SRC、EGFR、STAT3、ESR1、MTOR、CCND1 和 PPARG,这些靶点可用 GG 衍生化合物作为 GPCRs 相关癌症的治疗靶点。此外,分子对接实验表明 gnetin A、gnetin C、(-)-viniferin 和白藜芦醇二聚体与 MAPK3、SRC、EGFR 和 MTOR 具有很强的结合亲和力。生存分析确定了鉴定出的关键基因在癌症中的临床预后相关性。本研究为理解 GG 衍生活性化合物的治疗机制提供了一种新方法,为其在癌症治疗领域的潜在临床应用铺平了道路。