• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

利用快速现场评估载玻片和血清生物标志物进行自动肺癌亚型分类。

Automatic lung cancer subtyping using rapid on-site evaluation slides and serum biological markers.

机构信息

Department of Respiratory Endoscopy, Shanghai Chest Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China.

Department of Respiratory and Critical Care Medicine, Shanghai Chest Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China.

出版信息

Respir Res. 2024 Oct 29;25(1):391. doi: 10.1186/s12931-024-03021-8.

DOI:10.1186/s12931-024-03021-8
PMID:39472895
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11523640/
Abstract

BACKGROUND

Rapid on-site evaluation (ROSE) plays an important role during transbronchial sampling, providing an intraoperative cytopathologic evaluation. However, the shortage of cytopathologists limits its wide application. This study aims to develop a deep learning model to automatically analyze ROSE cytological images.

METHODS

The hierarchical multi-label lung cancer subtyping (HMLCS) model that combines whole slide images of ROSE slides and serum biological markers was proposed to discriminate between benign and malignant lesions and recognize different subtypes of lung cancer. A dataset of 811 ROSE slides and paired serum biological markers was retrospectively collected between July 2019 and November 2020, and randomly divided to train, validate, and test the HMLCS model. The area under the curve (AUC) and accuracy were calculated to assess the performance of the model, and Cohen's kappa (κ) was calculated to measure the agreement between the model and the annotation. The HMLCS model was also compared with professional staff.

RESULTS

The HMLCS model achieved AUC values of 0.9540 (95% confidence interval [CI]: 0.9257-0.9823) in malignant/benign classification, 0.9126 (95% CI: 0.8756-0.9365) in malignancy subtyping (non-small cell lung cancer [NSCLC], small cell lung cancer [SCLC], or other malignancies), and 0.9297 (95% CI: 0.9026-0.9603) in NSCLC subtyping (lung adenocarcinoma [LUAD], lung squamous cell carcinoma [LUSC], or NSCLC not otherwise specified [NSCLC-NOS]), respectively. In total, the model achieved an AUC of 0.8721 (95% CI: 0.7714-0.9258) and an accuracy of 0.7184 in the six-class classification task (benign, LUAD, LUSC, NSCLC-NOS, SCLC, or other malignancies). In addition, the model demonstrated a κ value of 0.6183 with the annotation, which was comparable to cytopathologists and superior to trained bronchoscopists and technicians.

CONCLUSION

The HMLCS model showed promising performance in the multiclassification of lung lesions or intrathoracic lymphadenopathy, with potential application to provide real-time feedback regarding preliminary diagnoses of specimens during transbronchial sampling procedures.

CLINICAL TRIAL NUMBER

Not applicable.

摘要

背景

实时现场评估(ROSE)在经支气管采样过程中发挥着重要作用,可为术中细胞病理学评估提供支持。然而,细胞病理学家的短缺限制了其广泛应用。本研究旨在开发一种深度学习模型,以自动分析 ROSE 细胞学图像。

方法

我们提出了一种分层多标签肺癌亚型(HMLCS)模型,该模型结合了 ROSE 切片的全玻片图像和血清生物标志物,用于区分良恶性病变并识别不同类型的肺癌。回顾性收集了 2019 年 7 月至 2020 年 11 月期间 811 张 ROSE 切片和配对的血清生物标志物数据,并将其随机分为训练、验证和测试集,以训练、验证和测试 HMLCS 模型。计算曲线下面积(AUC)和准确率来评估模型的性能,并计算科恩κ(κ)值以衡量模型与标注之间的一致性。还将 HMLCS 模型与专业人员进行了比较。

结果

HMLCS 模型在恶性/良性分类中的 AUC 值为 0.9540(95%置信区间[CI]:0.9257-0.9823),在恶性肿瘤亚型分类(非小细胞肺癌[NSCLC]、小细胞肺癌[SCLC]或其他恶性肿瘤)中的 AUC 值为 0.9126(95%CI:0.8756-0.9365),在 NSCLC 亚型分类(肺腺癌[LUAD]、肺鳞状细胞癌[LUSC]或非特指型 NSCLC[NSCLC-NOS])中的 AUC 值为 0.9297(95%CI:0.9026-0.9603)。总的来说,该模型在六分类任务(良性、LUAD、LUSC、NSCLC-NOS、SCLC 或其他恶性肿瘤)中的 AUC 值为 0.8721(95%CI:0.7714-0.9258),准确率为 0.7184。此外,模型与标注之间的κ值为 0.6183,与细胞病理学家相当,优于经过培训的支气管镜医生和技术员。

结论

HMLCS 模型在肺病变或胸内淋巴结病变的多分类中表现出良好的性能,有望在经支气管采样过程中为初步诊断标本提供实时反馈。

临床试验编号

不适用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2f97/11523640/739eef108b66/12931_2024_3021_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2f97/11523640/9e1223a57a30/12931_2024_3021_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2f97/11523640/ae8186c391da/12931_2024_3021_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2f97/11523640/67602d5aff9a/12931_2024_3021_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2f97/11523640/1072e0f75a33/12931_2024_3021_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2f97/11523640/739eef108b66/12931_2024_3021_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2f97/11523640/9e1223a57a30/12931_2024_3021_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2f97/11523640/ae8186c391da/12931_2024_3021_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2f97/11523640/67602d5aff9a/12931_2024_3021_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2f97/11523640/1072e0f75a33/12931_2024_3021_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2f97/11523640/739eef108b66/12931_2024_3021_Fig5_HTML.jpg

相似文献

1
Automatic lung cancer subtyping using rapid on-site evaluation slides and serum biological markers.利用快速现场评估载玻片和血清生物标志物进行自动肺癌亚型分类。
Respir Res. 2024 Oct 29;25(1):391. doi: 10.1186/s12931-024-03021-8.
2
NSCLC Subtyping in Conventional Cytology: Results of the International Association for the Study of Lung Cancer Cytology Working Group Survey to Determine Specific Cytomorphologic Criteria for Adenocarcinoma and Squamous Cell Carcinoma.非小细胞肺癌的常规细胞学亚型:国际肺癌研究协会细胞学工作组调查结果,旨在确定腺癌和鳞状细胞癌的特定细胞学形态学标准。
J Thorac Oncol. 2022 Jun;17(6):793-805. doi: 10.1016/j.jtho.2022.02.013. Epub 2022 Mar 22.
3
Diagnostic potential of protein serum biomarkers for distinguishing small and non-small cell lung cancer in patients with suspicious lung lesions.蛋白质血清生物标志物在鉴别可疑肺部病变患者小细胞肺癌与非小细胞肺癌中的诊断潜力
Biomarkers. 2024 Jul;29(5):315-323. doi: 10.1080/1354750X.2024.2360038. Epub 2024 Jun 18.
4
Triple test with tumor markers CYFRA 21.1, HE4, and ProGRP might contribute to diagnosis and subtyping of lung cancer.使用肿瘤标志物细胞角蛋白片段21.1(CYFRA 21.1)、人附睾蛋白4(HE4)和胃泌素释放肽前体(ProGRP)进行三联检测可能有助于肺癌的诊断和亚型分类。
Clin Biochem. 2018 Aug;58:15-19. doi: 10.1016/j.clinbiochem.2018.05.001. Epub 2018 May 2.
5
Cyto-histologic agreement in pathologic subtyping of non small cell lung carcinoma: review of 602 fine needle aspirates with follow-up surgical specimens over a nine year period and analysis of factors underlying failure to subtype.非小细胞肺癌病理亚型的细胞组织学一致性:回顾性分析 602 例细针抽吸活检与 9 年随访手术标本,并分析未能确定亚型的相关因素
Lung Cancer. 2012 Sep;77(3):501-6. doi: 10.1016/j.lungcan.2012.05.091. Epub 2012 May 31.
6
Adequacy of endobronchial ultrasound transbronchial needle aspiration samples in the subtyping of non-small cell lung cancer.经支气管超声引导针吸活检术标本对非小细胞肺癌分型的充分性。
Lung Cancer. 2013 Apr;80(1):30-4. doi: 10.1016/j.lungcan.2012.12.017. Epub 2013 Jan 10.
7
The application of artificial intelligence for Rapid On-Site Evaluation during flexible bronchoscopy.人工智能在柔性支气管镜检查快速现场评估中的应用。
Front Oncol. 2024 Mar 11;14:1360831. doi: 10.3389/fonc.2024.1360831. eCollection 2024.
8
New vision of HookEfficientNet deep neural network: Intelligent histopathological recognition system of non-small cell lung cancer.HookEfficientNet 深度神经网络的新视角:非小细胞肺癌的智能组织病理学识别系统。
Comput Biol Med. 2024 Aug;178:108710. doi: 10.1016/j.compbiomed.2024.108710. Epub 2024 Jun 4.
9
[Non-small cell lung cancer. New biomarkers for diagnostics and therapy].[非小细胞肺癌。用于诊断和治疗的新型生物标志物]
Pathologe. 2015 Nov;36 Suppl 2:189-93. doi: 10.1007/s00292-015-0084-1.
10
Suitability of computed tomography-guided biopsy specimens for subtyping and genotyping of non-small-cell lung cancer.计算机断层扫描引导下活检标本用于非小细胞肺癌亚型和基因分型的适宜性。
Clin Lung Cancer. 2013 Nov;14(6):719-25. doi: 10.1016/j.cllc.2013.06.002. Epub 2013 Jul 25.

本文引用的文献

1
The application of artificial intelligence for Rapid On-Site Evaluation during flexible bronchoscopy.人工智能在柔性支气管镜检查快速现场评估中的应用。
Front Oncol. 2024 Mar 11;14:1360831. doi: 10.3389/fonc.2024.1360831. eCollection 2024.
2
Guided Bronchoscopy for the Evaluation of Pulmonary Lesions: An Updated Meta-analysis.引导式支气管镜检查在肺部病变评估中的应用:一项更新的荟萃分析。
Chest. 2023 Jun;163(6):1589-1598. doi: 10.1016/j.chest.2022.12.044. Epub 2023 Jan 11.
3
Integrative Serum Metabolic Fingerprints Based Multi-Modal Platforms for Lung Adenocarcinoma Early Detection and Pulmonary Nodule Classification.
基于整合血清代谢指纹的多模态平台用于肺腺癌早期检测和肺结节分类。
Adv Sci (Weinh). 2022 Dec;9(34):e2203786. doi: 10.1002/advs.202203786. Epub 2022 Oct 18.
4
Deep Learning Using Endobronchial-Ultrasound-Guided Transbronchial Needle Aspiration Image to Improve the Overall Diagnostic Yield of Sampling Mediastinal Lymphadenopathy.使用支气管内超声引导下经支气管针吸活检图像的深度学习来提高纵隔淋巴结病变采样的总体诊断率。
Diagnostics (Basel). 2022 Sep 16;12(9):2234. doi: 10.3390/diagnostics12092234.
5
Hierarchical clock-scale hand-drawn mapping as a simple method for bronchoscopic navigation in peripheral pulmonary nodule.分层时钟尺度手绘映射作为一种在周围性肺结节支气管镜导航的简单方法。
Respir Res. 2022 Sep 14;23(1):245. doi: 10.1186/s12931-022-02160-0.
6
A deep learning-based segmentation system for rapid onsite cytologic pathology evaluation of pancreatic masses: A retrospective, multicenter, diagnostic study.基于深度学习的胰腺肿块快速现场细胞学病理评估分割系统:一项回顾性、多中心诊断研究。
EBioMedicine. 2022 Jun;80:104022. doi: 10.1016/j.ebiom.2022.104022. Epub 2022 May 2.
7
Effectiveness of convolutional neural networks in the interpretation of pulmonary cytologic images in endobronchial ultrasound procedures.卷积神经网络在支气管内超声程序中肺细胞图像解读中的有效性。
Cancer Med. 2021 Dec;10(24):9047-9057. doi: 10.1002/cam4.4383. Epub 2021 Nov 1.
8
Weakly supervised learning for classification of lung cytological images using attention-based multiple instance learning.基于注意力的多实例学习在肺部细胞学图像分类中的弱监督学习。
Sci Rep. 2021 Oct 13;11(1):20317. doi: 10.1038/s41598-021-99246-4.
9
Data-efficient and weakly supervised computational pathology on whole-slide images.基于全切片图像的数据高效和弱监督计算病理学。
Nat Biomed Eng. 2021 Jun;5(6):555-570. doi: 10.1038/s41551-020-00682-w. Epub 2021 Mar 1.
10
An annotation-free whole-slide training approach to pathological classification of lung cancer types using deep learning.基于深度学习的无注释全切片肺癌类型病理分类训练方法。
Nat Commun. 2021 Feb 19;12(1):1193. doi: 10.1038/s41467-021-21467-y.