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本文引用的文献

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Biophys J. 2022 Aug 16;121(16):3034-3048. doi: 10.1016/j.bpj.2022.07.018. Epub 2022 Jul 16.
2
Model architectures for bacterial membranes.细菌膜的模型架构。
Biophys Rev. 2022 Mar 7;14(1):111-143. doi: 10.1007/s12551-021-00913-7. eCollection 2022 Feb.
3
Development and Validation of a Simple Method to Quantify Contents of Phospholipids in Krill Oil by Fourier-Transform Infrared Spectroscopy.一种通过傅里叶变换红外光谱法定量分析磷虾油中磷脂含量的简单方法的开发与验证
Foods. 2021 Dec 24;11(1):41. doi: 10.3390/foods11010041.
4
Biophysical study of the structure and dynamics of the antimicrobial peptide maximin 1.抗菌肽maximin 1的结构与动力学的生物物理研究
J Pept Sci. 2022 Feb;28(2):e3370. doi: 10.1002/psc.3370. Epub 2021 Sep 26.
5
Langmuir Monolayer Techniques for the Investigation of Model Bacterial Membranes and Antibiotic Biodegradation Mechanisms.用于研究模型细菌膜和抗生素生物降解机制的朗缪尔单分子层技术
Membranes (Basel). 2021 Sep 14;11(9):707. doi: 10.3390/membranes11090707.
6
Highly accurate protein structure prediction with AlphaFold.利用 AlphaFold 进行高精度蛋白质结构预测。
Nature. 2021 Aug;596(7873):583-589. doi: 10.1038/s41586-021-03819-2. Epub 2021 Jul 15.
7
Estimation of pore dimensions in lipid membranes induced by peptides and other biomolecules: A review.脂质膜中由肽和其他生物分子诱导的孔尺寸的估计:综述。
Biochim Biophys Acta Biomembr. 2021 Apr 1;1863(4):183551. doi: 10.1016/j.bbamem.2021.183551. Epub 2021 Jan 16.
8
Membrane Binding of Antimicrobial Peptides Is Modulated by Lipid Charge Modification.抗菌肽通过脂质电荷修饰调节其膜结合。
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DAPTOMYCIN, its membrane-active mechanism vs. that of other antimicrobial peptides.达托霉素,其与其他抗菌肽的膜活性机制比较。
Biochim Biophys Acta Biomembr. 2020 Oct 1;1862(10):183395. doi: 10.1016/j.bbamem.2020.183395. Epub 2020 Jun 9.

Maximin 3 与脂质膜相互作用和特异性的分子和能量分析:体外和计算评估。

Molecular and energetic analysis of the interaction and specificity of Maximin 3 with lipid membranes: In vitro and in silico assessments.

机构信息

Instituto de Ciencias Físicas, Universidad Nacional Autónoma de México (ICF-UNAM), Cuernavaca, Morelos, México.

Laboratorio de Física Biológica, Instituto de Física, Universidad Autónoma de San Luis Potosí, San Luis Potosí, San Luis Potosí, México.

出版信息

Protein Sci. 2024 Nov;33(11):e5188. doi: 10.1002/pro.5188.

DOI:10.1002/pro.5188
PMID:39473071
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11633330/
Abstract

In this study, the interaction of antimicrobial peptide Maximin 3 (Max3) with three different lipid bilayer models was investigated to gain insight into its mechanism of action and membrane specificity. Bilayer perturbation assays using liposome calcein leakage dose-response curves revealed that Max3 is a selective membrane-active peptide. Dynamic light scattering recordings suggest that the peptide incorporates into the liposomal structure without producing a detergent effect. Langmuir monolayer compression assays confirmed the membrane inserting capacity of the peptide. Attenuated total reflection-Fourier transform infrared spectroscopy showed that the fingerprint signals of lipid phospholipid hydrophilic head groups and hydrophobic acyl chains are altered due to Max3-membrane interaction. On the other hand, all-atom molecular dynamics simulations (MDS) of the initial interaction with the membrane surface corroborated peptide-membrane selectivity. Peptide transmembrane MDS shed light on how the peptide differentially modifies lipid bilayer properties. Molecular mechanics Poisson-Boltzmann surface area calculations revealed a specific electrostatic interaction fingerprint of the peptide for each membrane model with which they were tested. The data generated from the in silico approach could account for some of the differences observed experimentally in the activity and selectivity of Max3.

摘要

在这项研究中,研究了抗菌肽 Maximin 3 (Max3) 与三种不同的脂质双层模型的相互作用,以深入了解其作用机制和膜特异性。使用脂质体钙黄绿素渗漏量反应曲线的双层扰动测定表明,Max3 是一种选择性的膜活性肽。动态光散射记录表明,该肽在不产生去污剂效应的情况下整合到脂质体结构中。Langmuir 单层压缩测定证实了该肽的膜插入能力。衰减全反射傅里叶变换红外光谱显示,由于 Max3-膜相互作用,脂质磷脂亲水头部基团和疏水酰基链的指纹信号发生了改变。另一方面,与膜表面的初始相互作用的全原子分子动力学模拟 (MDS) 证实了肽的膜选择性。肽跨膜 MDS 揭示了肽如何差异地修饰脂质双层性质。分子力学泊松-玻尔兹曼表面区域计算揭示了每种与肽相互作用的膜模型的特定静电相互作用指纹。从计算方法获得的数据可以解释在 Max3 的活性和选择性方面观察到的一些实验差异。