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阐明 ATP 作为生物分子聚集体增溶剂的作用。

Elucidating ATP's role as solubilizer of biomolecular aggregate.

机构信息

Tata Institute of Fundamental Research Hyderabad, Hyderabad, India.

Indian Institute of Science Education and Research Kolkata, Kolkata, India.

出版信息

Elife. 2024 Oct 30;13:RP99150. doi: 10.7554/eLife.99150.

Abstract

Proteins occurring in significantly high concentrations in cellular environments (over 100 mg/ml) and functioning in crowded cytoplasm, often face the prodigious challenges of aggregation which are the pathological hallmark of aging and are critically responsible for a wide spectrum of rising human diseases. Here, we combine a joint-venture of complementary wet-lab experiment and molecular simulation to discern the potential ability of adenosine triphosphate (ATP) as solubilizer of protein aggregates. We show that ATP prevents both condensation of aggregation-prone intrinsically disordered protein Aβ40 and promotes dissolution of preformed aggregates. Computer simulation links ATP's solubilizing role to its ability to modulate protein's structural plasticity by unwinding protein conformation. We show that ATP is positioned as a superior biological solubilizer of protein aggregates over traditional chemical hydrotropes, potentially holding promises in therapeutic interventions in protein-aggregation-related diseases. Going beyond its conventional activity as energy currency, the amphiphilic nature of ATP enables its protein-specific interaction that would enhance ATP's efficiency in cellular processes.

摘要

在细胞环境中(超过 100mg/ml)大量存在并在拥挤细胞质中发挥作用的蛋白质,经常面临着聚集的巨大挑战,而聚集是衰老的病理标志,也是导致广泛出现人类疾病的关键因素。在这里,我们结合互补的湿实验室实验和分子模拟的联合冒险,来辨别三磷酸腺苷(ATP)作为蛋白质聚集体增溶剂的潜在能力。我们表明,ATP 可以防止聚集倾向的内在无序蛋白 Aβ40 的凝聚,并促进已形成的聚集体的溶解。计算机模拟将 ATP 的增溶作用与其通过解开蛋白质构象来调节蛋白质结构可塑性的能力联系起来。我们表明,ATP 作为一种优于传统化学增溶剂的蛋白质聚集体的生物增溶剂,在蛋白质聚集相关疾病的治疗干预中具有潜在的应用前景。ATP 的两亲性质超越了其作为能量货币的传统作用,使其能够与蛋白质进行特异性相互作用,从而提高 ATP 在细胞过程中的效率。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ee90/11524580/1fb2a233295c/elife-99150-fig1.jpg

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