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探索和识别护理中的糖尿病靶点:CDH1 和 DVL1。

Exploration and identification of diabetes targets in nursing: CDH1 and DVL1.

机构信息

Urology and Metabolic Rehabilitation Center, Beijing Rehabilitation Hospital, Capital Medical University, Xixia Zhuang, Shijingshan District of Beijing, China.

出版信息

Medicine (Baltimore). 2024 Nov 1;103(44):e40002. doi: 10.1097/MD.0000000000040002.

Abstract

Diabetes is a chronic disease caused by absolute or relative insufficiency of insulin secretion and impaired insulin utilization. CDH1 and DVL1 role in diabetes and its nursing care is unclear. The diabetes dataset GSE21321 and GSE19790 profiles were downloaded from the gene expression omnibus (GEO) database. Perform differentially expressed genes (DEGs) screening, weighted gene co-expression network analysis (WGCNA), protein-protein interaction (PPI) network construction and analysis, functional enrichment analysis, gene set enrichment analysis (GSEA), immune infiltration analysis, and Comparative Toxicogenomics Database (CTD) analysis. Gene expression heat map was drawn. TargetScan was used to screen the miRNA that regulates central DEGs. 1983 DEGs were obtained. According to Gene Ontology (GO) analysis, they were mainly enriched in signal regulation, catenin complexes, and signal receptor binding. In Kyoto Encyclopedia of Gene and Genome (KEGG) analysis, they were mainly concentrated in the Rap1 signaling pathway, cAMP signaling pathway, and Hippo signaling pathway. The DEGs are mainly enriched in cell signaling, Wnt signaling vesicles, growth factor activity, and the interaction between neural active ligands and receptors. In the enrichment project of Metascape, BMP signaling pathways and cell population proliferation can be seen in the GO enrichment project. The soft threshold power in WGCNA is set to 5. A total of 15 modules were generated. Core gene expression heatmap showed that core genes (CTNNB1, CDH1, DVL1) were highly expressed in diabetes samples. CTD analysis showed thatCTNNB1, CDH1, DVL1were associated with weight gain, inflammation, and necrosis. CDH1 and DVL1 are highly expressed in diabetes and may become molecular targets for diabetes and its care.

摘要

糖尿病是由胰岛素分泌绝对或相对不足和胰岛素利用受损引起的慢性疾病。CDH1 和 DVL1 在糖尿病中的作用及其护理尚不清楚。从基因表达综合数据库(GEO)下载糖尿病数据集 GSE21321 和 GSE19790 谱。进行差异表达基因(DEGs)筛选、加权基因共表达网络分析(WGCNA)、蛋白质-蛋白质相互作用(PPI)网络构建与分析、功能富集分析、基因集富集分析(GSEA)、免疫浸润分析和比较毒理学基因组数据库(CTD)分析。绘制基因表达热图。使用 TargetScan 筛选调节中枢 DEGs 的 miRNA。获得 1983 个 DEGs。根据基因本体论(GO)分析,它们主要富集在信号调节、连环蛋白复合物和信号受体结合中。在京都基因与基因组百科全书(KEGG)分析中,它们主要集中在 Rap1 信号通路、cAMP 信号通路和 Hippo 信号通路中。DEGs 主要富集在细胞信号、Wnt 信号囊泡、生长因子活性以及神经活性配体与受体的相互作用中。在 Metascape 的富集项目中,可以看到 BMP 信号通路和细胞群体增殖。WGCNA 的软阈值功率设置为 5。共生成 15 个模块。核心基因表达热图显示,核心基因(CTNNB1、CDH1、DVL1)在糖尿病样本中高表达。CTD 分析表明 CTNNB1、CDH1、DVL1 与体重增加、炎症和坏死有关。CDH1 和 DVL1 在糖尿病中高表达,可能成为糖尿病及其护理的分子靶标。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1249/11537580/b076215cd4d3/medi-103-e40002-g001.jpg

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