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利用深度单神经元RNA测序探索人类躯体感觉的神经基础。

Leveraging deep single-soma RNA sequencing to explore the neural basis of human somatosensation.

作者信息

Yu Huasheng, Nagi Saad S, Usoskin Dmitry, Hu Yizhou, Kupari Jussi, Bouchatta Otmane, Yan Hanying, Cranfill Suna Li, Gautam Mayank, Su Yijing, Lu You, Wymer James, Glanz Max, Albrecht Phillip, Song Hongjun, Ming Guo-Li, Prouty Stephen, Seykora John, Wu Hao, Ma Minghong, Marshall Andrew, Rice Frank L, Li Mingyao, Olausson Håkan, Ernfors Patrik, Luo Wenqin

机构信息

Department of Neuroscience, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA.

Department of Biomedical and Clinical Sciences, Linköping University, Linköping, Sweden.

出版信息

Nat Neurosci. 2024 Dec;27(12):2326-2340. doi: 10.1038/s41593-024-01794-1. Epub 2024 Nov 4.

Abstract

The versatility of somatosensation arises from heterogeneous dorsal root ganglion (DRG) neurons. However, soma transcriptomes of individual human (h)DRG neurons-critical information to decipher their functions-are lacking due to technical difficulties. In this study, we isolated somata from individual hDRG neurons and conducted deep RNA sequencing (RNA-seq) to detect, on average, over 9,000 unique genes per neuron, and we identified 16 neuronal types. These results were corroborated and validated by spatial transcriptomics and RNAscope in situ hybridization. Cross-species analyses revealed divergence among potential pain-sensing neurons and the likely existence of human-specific neuronal types. Molecular-profile-informed microneurography recordings revealed temperature-sensing properties across human sensory afferent types. In summary, by employing single-soma deep RNA-seq and spatial transcriptomics, we generated an hDRG neuron atlas, which provides insights into human somatosensory physiology and serves as a foundation for translational work.

摘要

躯体感觉的多样性源于异质性背根神经节(DRG)神经元。然而,由于技术难题,个体人类(h)DRG神经元的胞体转录组——解读其功能的关键信息——尚付阙如。在本研究中,我们从单个hDRG神经元中分离出胞体,并进行了深度RNA测序(RNA-seq),平均每个神经元检测到超过9000个独特基因,且我们鉴定出了16种神经元类型。这些结果通过空间转录组学和RNAscope原位杂交得到了证实和验证。跨物种分析揭示了潜在痛觉感受神经元之间的差异以及可能存在的人类特异性神经元类型。基于分子图谱的微神经图记录揭示了人类感觉传入类型的温度感知特性。总之,通过采用单胞体深度RNA-seq和空间转录组学,我们生成了一个hDRG神经元图谱,该图谱为人类躯体感觉生理学提供了见解,并为转化研究工作奠定了基础。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2f7a/11614738/db0a684dfe2a/41593_2024_1794_Fig1_HTML.jpg

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