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单核细胞/巨噬细胞在原发性干燥综合征发病机制中的关键作用:孟德尔随机化和单细胞测序的新证据

The critical involvement of monocytes/macrophages in the pathogenesis of primary Sjögren's syndrome: New evidence from Mendelian randomization and single-cell sequencing.

作者信息

Ding Yimei, Luan Xue, Hou Jiaqi

机构信息

Department of Rheumatology and Immunology, Yueyang Hospital of Integrated Traditional Chinese and Western Medicine, Shanghai University of Traditional Chinese Medicine, Shanghai, China.

出版信息

Heliyon. 2024 Oct 11;10(20):e39130. doi: 10.1016/j.heliyon.2024.e39130. eCollection 2024 Oct 30.

Abstract

BACKGROUND

Primary Sjögren's syndrome (pSS) stands as a chronic autoimmune disease characterized by an elusive pathogenesis. The synergy of single-cell RNA sequencing and Mendelian randomization (MR) analysis provides an opportunity to comprehensively unravel the contributory role of monocytes/macrophages in the intricate pathogenesis of pSS.

METHODS

Differentially expressed genes (DEGs) of various types of immune cells were analyzed after annotating single-cell RNA sequencing (scRNA-seq) data. MR analysis of expression quantitative trait loci (eQTL) and protein quantitative trait loci (pQTL) was conducted to search for key pathogenic genes and proteins. Cellular localization of pathogenic genes was performed based on scRNA-seq data. Variations in signaling pathways between immune cells were further analyzed.

RESULTS

A total of 1434 significant DEGs were identified. Among these, 60 genes exhibited strong relevance to the occurrence of pSS, of which 32 genes differentially expressed in monocytes/macrophages. CTSS was found to be a significant risk protein with a p-value of 0.001 and an odds ratio of 1.384 (1.147-1.669), showing pronounced expression in monocytes/macrophages. Furthermore, monocytes/macrophages displayed heightened expression levels of MXD1, AMPD2, TNFSF10, FTL, UBXN11, CSF3R, and LILRA5. The analysis of intercellular signaling revealed increased signal intensity in both incoming and outgoing signals in monocytes/macrophages. The signaling interactions between monocytes/macrophages, B cells, and T cells exhibited varying degrees of deviation.

CONCLUSIONS

This study highlights the significant involvement of monocytes/macrophages in the pathogenesis of pSS, as evidenced by MR analysis and scRNA-seq analysis. This suggests monocytes/macrophages as a focal point for pathogenesis research and potential therapeutic targeting in pSS.

摘要

背景

原发性干燥综合征(pSS)是一种慢性自身免疫性疾病,其发病机制尚不明确。单细胞RNA测序与孟德尔随机化(MR)分析相结合,为全面揭示单核细胞/巨噬细胞在pSS复杂发病机制中的作用提供了契机。

方法

对单细胞RNA测序(scRNA-seq)数据进行注释后,分析各类免疫细胞的差异表达基因(DEG)。进行表达定量性状位点(eQTL)和蛋白质定量性状位点(pQTL)的MR分析,以寻找关键致病基因和蛋白质。基于scRNA-seq数据确定致病基因的细胞定位。进一步分析免疫细胞间信号通路的差异。

结果

共鉴定出1434个显著差异表达基因。其中,60个基因与pSS的发生密切相关,32个基因在单核细胞/巨噬细胞中差异表达。CTSS被发现是一种显著的风险蛋白,p值为0.001,优势比为1.384(1.147-1.669),在单核细胞/巨噬细胞中表达明显。此外,单核细胞/巨噬细胞中MXD1、AMPD2、TNFSF10、FTL、UBXN11、CSF3R和LILRA5的表达水平升高。细胞间信号分析显示,单核细胞/巨噬细胞中传入和传出信号的强度均增加。单核细胞/巨噬细胞与B细胞、T细胞之间的信号相互作用存在不同程度的偏差。

结论

本研究通过MR分析和scRNA-seq分析表明,单核细胞/巨噬细胞在pSS发病机制中起重要作用。这提示单核细胞/巨噬细胞是pSS发病机制研究和潜在治疗靶点的重点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1768/11532255/ff258a8a6881/gr1.jpg

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