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槟榔全基因组 MYB 基因家族鉴定及 AcTDF 在转基因拟南芥中的功能研究。

Genome-wide investigation of MYB gene family in Areca catechu and potential roles of AcTDF in transgenic Arabidopsis.

机构信息

Liaoning Research Institute of Cash Crops, Liaoyang, 111000, China.

Hainan Key Laboratory for Sustainable Utilization of Tropical Bioresources, College of Tropical Crops, Hainan University, Haikou, 570228, China.

出版信息

Mol Biol Rep. 2024 Nov 5;51(1):1121. doi: 10.1007/s11033-024-10055-0.

Abstract

BACKGROUND

MYB protein, a crucial transcription factor, holds crucial importance in plant growth, development, stress responses, and secondary metabolite regulation. While MYB proteins have been extensively studied, research on MYBs within the palm family, particularly in Areca catechu, remains limited.

METHODS AND RESULTS

This study identified 259 MYB genes in Areca catechu, including 105 1R-MYBs, 150 R2R3-MYBs, 3 3R-MYBs, and 1 4R-MYBs. Physicochemical properties, collinearity, and gene structure of these genes were analyzed. The AcMYB is distributed across 16 chromosomes of A.catechu and has 119 and 195 homologs in Arabidopsis and rice, respectively. Cis-acting elements in the promoter region suggest roles in plant hormones, growth, development, and stress. R2R3-MYB genes were divided into eight groups based on tissue expression profiles. The flowering-related gene AcTDF is highly expressed in male flowers. Overexpression of AcTDF in Arabidopsis promotes early flowering, upregulates AtSOC1 and AtFUL, and enhances tolerance to drought and salt stress.

CONCLUSIONS

These results provide valuable insights for the identification and analysis of the MYB gene family in Areca catechu and offer a basis for the subsequent verification of its related functions and the role and significance of its role in the evolution of palms.

摘要

背景

MYB 蛋白作为一种关键的转录因子,在植物的生长、发育、应激响应和次生代谢物调控中具有重要作用。尽管已经对 MYB 蛋白进行了广泛的研究,但对棕榈科植物中的 MYB 蛋白,特别是在槟榔中的研究仍然有限。

方法和结果

本研究在槟榔中鉴定出 259 个 MYB 基因,包括 105 个 1R-MYB、150 个 R2R3-MYB、3 个 3R-MYB 和 1 个 4R-MYB。对这些基因的理化性质、共线性和基因结构进行了分析。AcMYB 基因分布在槟榔的 16 条染色体上,在拟南芥和水稻中分别有 119 和 195 个同源基因。启动子区域中的顺式作用元件表明其在植物激素、生长、发育和应激反应中具有作用。R2R3-MYB 基因根据组织表达谱分为八个亚组。与开花相关的基因 AcTDF 在雄花中高表达。在拟南芥中过表达 AcTDF 可促进早期开花,上调 AtSOC1 和 AtFUL,并增强对干旱和盐胁迫的耐受性。

结论

这些结果为鉴定和分析槟榔中的 MYB 基因家族提供了有价值的信息,并为随后验证其相关功能以及在棕榈科进化中的作用和意义提供了基础。

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