Laboratory of Human and Medical Genetics (LGHM) / Graduate Program Genetics and Molecular Biology (PPGBM), Federal University of Pará (UFPA), Belém, 66075-110, PA, Brazil.
Graduate Program Bioinformatics, Federal University of Rio Grande do Norte (UFRN), Natal, 59078-970, RN, Brazil.
Sci Rep. 2024 Nov 9;14(1):27332. doi: 10.1038/s41598-024-78170-3.
Despite all the efforts acquired in four years of the COVID-19 pandemic, the path to a full understanding of the biological mechanisms involved in this disease remains complex. This is partly due to a combination of factors, including the inherent characteristics of the infection, socio-environmental elements, and the variations observed within both the viral and the human genomes. Thus, this study aimed to investigate the correlation between genetic host factors and the severity of COVID-19. We conducted whole exome sequencing (WES) of 124 patients, categorized into severe and non-severe groups. From the whole exome sequencing (WES) association analysis, four variants (rs1770731 in CRYBG1, rs7221209 in DNAH17, rs3826295 in DGKE, and rs7913626 in CFAP46) were identified as potentially linked to a protective effect against the clinical severity of COVID-19, which may explain the less severe impact of COVID-19 on the Northern Region. Our findings underscore the importance of carrying out more genomic studies in populations living in the Amazon, one of the most diverse from the point of view of the presence of rare and specific alleles. To our knowledge, this is the first WES study of admixed individuals from the Brazilian Amazon to investigate genomic variants associated with the clinical severity of COVID-19.
尽管在 COVID-19 大流行的四年中付出了所有努力,但要完全了解这种疾病涉及的生物学机制仍然很复杂。这部分是由于多种因素的综合作用,包括感染的固有特征、社会环境因素以及病毒和人类基因组内观察到的变异。因此,本研究旨在调查宿主遗传因素与 COVID-19 严重程度之间的相关性。我们对 124 名患者进行了全外显子组测序 (WES),并将其分为严重组和非严重组。通过全外显子组测序 (WES) 关联分析,发现了四个变体(CRYBG1 中的 rs1770731、DNAH17 中的 rs7221209、DGKE 中的 rs3826295 和 CFAP46 中的 rs7913626)与 COVID-19 临床严重程度的保护作用相关,这可能解释了 COVID-19 对北部地区影响较小的原因。我们的研究结果强调了在亚马逊地区进行更多基因组研究的重要性,因为从稀有和特定等位基因存在的角度来看,亚马逊地区是最多样化的地区之一。据我们所知,这是首次对来自巴西亚马逊地区的混合人群进行全外显子组测序,以研究与 COVID-19 临床严重程度相关的基因组变体。