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评估尼日利亚小反刍兽疫监测网络结构改造的影响:骨干和哨点节点的作用。

Assessing the impact of structural modifications in the construction of surveillance network for Peste des petits ruminants disease in Nigeria: The role of backbone and sentinel nodes.

机构信息

CIRAD, UMR ASTRE, INRAE, Montpellier, France.

CIRAD, UMR ASTRE, Université de Montpellier, Montpellier, France.

出版信息

PLoS One. 2024 Nov 18;19(11):e0303237. doi: 10.1371/journal.pone.0303237. eCollection 2024.

Abstract

Peste des petits ruminants (PPR) is a highly contagious disease affecting mainly sheep and goats. Livestock movements contribute to the spread of the disease by introducing it to naive areas or exposing susceptible animals to it in infected regions. Because of its socio-economic impact, the Food and Agriculture Organisation (FAO) and the World Organization for Animal Health (WOAH) have set the goal to eradicate it by 2030, one of the key steps being the improvement of surveillance networks. The present study aimed to provide tools to identify areas that could serve as sentinel nodes, i.e. areas that may be rapidly infected at the onset of epidemics. Using data from a market survey conducted in Northern Nigeria, we reconstructed the small ruminants mobility network and simulated the diffusion of PPR virus through animal movement. From the analysis of simulation outcomes, we investigated which nodes could act as sentinel nodes under specific conditions for disease transmission. We considered several modified networks to get around the problem of data only being available for part of the overall network structure and to account for potential errors made during the field study. For each configuration, we simulated the spread of PPR using a stochastic Susceptible-Infectious (SI) model based on animal movements to assess the epidemics' extent and the presence of recurrent patterns to identify potential sentinel nodes. We extracted the backbone of the reference network and checked for the presence of sentinel nodes within it. We investigated how the origin (seed) of the epidemics could affect the propagation pattern by comparing and grouping seeds based on their respective transmission paths. Results showed that the isolated backbone contains 45% of sentinel nodes that remain stable or undergo only minor changes in 9 out of 11 configurations. On top of that, the characteristics of sentinel nodes identified in the backbone are not influenced by the severity of the disease. The H index, in-degree, and eigenvector are the most essential variables. This study provides an overview of the major axes of animal movements in Nigeria and the most vulnerable locations that should be prioritized for monitoring livestock diseases like PPR.

摘要

小反刍兽疫(PPR)是一种高度传染性疾病,主要影响绵羊和山羊。牲畜流动通过将疾病引入到无病地区或使易感动物暴露于感染地区的病毒中来促进疾病的传播。由于其对社会经济的影响,粮食及农业组织(FAO)和世界动物卫生组织(WOAH)已经设定了到 2030 年消灭它的目标,其中一个关键步骤是改进监测网络。本研究旨在提供工具来确定可以作为哨点的区域,即疾病流行时可能迅速感染的区域。我们利用在尼日利亚北部进行的市场调查数据,重建了小反刍动物的移动网络,并模拟了 PPR 病毒通过动物运动的扩散。通过对模拟结果的分析,我们研究了在特定的疾病传播条件下,哪些节点可以作为哨点节点。我们考虑了几种修改后的网络,以解决仅部分网络结构数据可用的问题,并考虑到实地研究中可能存在的误差。对于每种配置,我们使用基于动物运动的随机易感感染(SI)模型模拟 PPR 的传播,以评估疾病的传播范围和存在的复发模式,从而确定潜在的哨点节点。我们提取了参考网络的骨干,并检查了其内部是否存在哨点节点。我们通过比较和根据各自的传播路径对种子进行分组,研究了疾病起源(种子)如何影响传播模式。结果表明,在 11 种配置中的 9 种中,孤立的骨干包含 45%的哨点节点,这些节点保持稳定或仅发生微小变化。除此之外,骨干中识别出的哨点节点的特征不受疾病严重程度的影响。H 指数、入度和特征向量是最重要的变量。本研究提供了尼日利亚动物运动的主要轴和最脆弱的位置的概述,这些位置应优先监测小反刍兽疫等牲畜疾病。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aae3/11573210/9905396013f8/pone.0303237.g001.jpg

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