Li Yunfei, Wang Bingyao, Wang Yanli, He Wenqiang, Wu Xudong, Zhang Xue, Teng Xiaorong, Liu Lichao, Yang Haotian
Key Laboratory of Ecological Safety and Sustainable Development in Arid Lands, Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Lanzhou, China.
Shapotou Desert Research and Experiment Station, Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Lanzhou, China.
Front Plant Sci. 2024 Nov 7;15:1473503. doi: 10.3389/fpls.2024.1473503. eCollection 2024.
The rhizosphere microbial community helps govern biogeochemical cycling and facilitates complex plant-soil feedback. Understanding the evolutionary dynamics of microbial community structure and functional genes during vegetation succession is crucial for quantifying and understanding ecosystem processes and functions in restored sandy deserts. In this study, the rhizosphere microbial community structure of 11-66-year-old dominant shrubs in a desert revegetation area was examined using shotgun metagenomic sequencing. The interactions between the microbial community structure, functional gene abundances, soil properties, and plant characteristics of different stand ages were comprehensively investigated. The abundance of unique species first increased before subsequently decreasing with stand age, with shared species accounting for only 47.33%-59.42% of the total operational taxonomic units (OTUs). Copiotrophs such as Actinobacteria and Proteobacteria were found to dominate the rhizosphere soil microbial community, with their relative abundance accounting for 75.28%-81.41% of the total OTUs. There was a gradual shift in dominant microbial functional genes being involved in cellular processes towards those involved in environmental information processing and metabolism as stand age increased. Additionally, temporal partitioning was observed in both the microbial co-occurrence network complexity and topological parameters within the rhizosphere soil. Redundancy analysis revealed that dissolved organic carbon was the primary determinant influencing shifts in microbial community structure. Understanding the evolution of microbial community structure and function contributes to identifying potential mechanisms associating the soil microbiome with dominant sand-fixing shrubs as well as understanding the rhizosphere microbiome assembly process. These results shed light on the role of the rhizosphere microbiome in biogeochemical cycling and other ecosystem functions following revegetation of temperate sandy deserts.
根际微生物群落有助于控制生物地球化学循环,并促进复杂的植物-土壤反馈。了解植被演替过程中微生物群落结构和功能基因的进化动态,对于量化和理解恢复后的沙地沙漠中的生态系统过程和功能至关重要。在本研究中,利用鸟枪法宏基因组测序技术,对沙漠植被恢复区11至66年生优势灌木的根际微生物群落结构进行了检测。全面研究了不同林龄的微生物群落结构、功能基因丰度、土壤性质和植物特征之间的相互作用。独特物种的丰度先随林龄增加,随后下降,共有物种仅占总可操作分类单元(OTU)的47.33%-59.42%。发现放线菌和变形菌等富养菌在根际土壤微生物群落中占主导地位,其相对丰度占总OTU的75.28%-81.41%。随着林龄的增加,参与细胞过程的主要微生物功能基因逐渐向参与环境信息处理和代谢的基因转变。此外,在根际土壤微生物共现网络的复杂性和拓扑参数中均观察到时间分区现象。冗余分析表明,溶解有机碳是影响微生物群落结构变化的主要决定因素。了解微生物群落结构和功能的演变,有助于确定将土壤微生物群与优势固沙灌木联系起来的潜在机制,以及理解根际微生物群的组装过程。这些结果揭示了根际微生物群在温带沙地沙漠植被恢复后生物地球化学循环和其他生态系统功能中的作用。