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内生细菌群落、核心分类群以及……子实体内部的功能变异

Endophytic Bacterial Community, Core Taxa, and Functional Variations Within the Fruiting Bodies of .

作者信息

Zhang Kaixuan, Chen Xin, Shi Xiaofei, Yang Zhenyan, Yang Lian, Liu Dong, Yu Fuqiang

机构信息

The Germplasm Bank of Wild Species & Yunnan Key Laboratory for Fungal Diversity and Green Development, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650201, China.

College of Life Sciences, University of Chinese Academy of Sciences, Beijing 101408, China.

出版信息

Microorganisms. 2024 Nov 12;12(11):2296. doi: 10.3390/microorganisms12112296.

Abstract

Macrofungi do not exist in isolation but establish symbiotic relationships with microorganisms, particularly bacteria, within their fruiting bodies. Herein, we examined the fruiting bodies' bacteriome of seven species of the genus collected from four locations in Yunnan, China. By analyzing bacterial diversity, community structure, and function through 16S rRNA sequencing, we observed the following: (1) In total, 4,840,291 high-quality bacterial sequences obtained from the fruiting bodies were grouped into 16,577 amplicon sequence variants (ASVs), and all samples comprised 23 shared bacterial ASVs. (2) The --- complex was found to be the most abundant and presumably coexisting bacterium. (3) A network analysis revealed that endophytic bacteria formed functional groups, which were dominated by the genera ---, , and . (4) The diversity, community structure, and dominance of ecological functions (chemoheterotrophy and nitrogen cycling) among endophytic bacteria were significantly shaped by geographic location, habitat, and fungal genotype, rather than fruiting body type. (5) A large number of the endophytic bacteria within are bacteria that promote plant growth; however, some pathogenic bacteria that pose a threat to human health might also be present. This research advances our understanding of the microbial ecology of and the factors shaping its endophytic bacterial communities.

摘要

大型真菌并非孤立存在,而是在其子实体内与微生物,尤其是细菌建立共生关系。在此,我们研究了从中国云南四个地点采集的七种该属物种子实体的细菌群落。通过16S rRNA测序分析细菌多样性、群落结构和功能,我们观察到以下几点:(1)从子实体获得的总共4,840,291条高质量细菌序列被归类为16,577个扩增子序列变体(ASV),所有样本包含23个共享细菌ASV。(2)--- 复合体被发现是最丰富且可能共存的细菌。(3)网络分析表明内生细菌形成功能组,其主要由 ---、--- 和 --- 属主导。(4)内生细菌的多样性、群落结构以及生态功能(化学异养和氮循环)的优势受到地理位置、栖息地和真菌基因型的显著影响,而非子实体类型。(5)--- 内的大量内生细菌是促进植物生长的细菌;然而,也可能存在一些对人类健康构成威胁的致病细菌。这项研究增进了我们对 --- 的微生物生态学以及塑造其内生细菌群落的因素的理解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4b10/11596330/fab050109289/microorganisms-12-02296-g001.jpg

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