Uyeda Kylie S, Follmer Alec H, Borovik A S
Department of Chemistry, University of California-Irvine Irvine CA 92697 USA
Chem Sci. 2024 Nov 18;16(1):98-103. doi: 10.1039/d4sc06667g. eCollection 2024 Dec 18.
Recent studies have revealed critical roles for the local environments surrounding metallocofactors, such as the newly identified Cu site in particulate methane monooxygenases (pMMOs) and the second sphere aromatic residues in lytic polysaccharide monooxygenases (LPMOs), implicated in the protection against oxidative damage. However, these features are subjects of continued debate. Our work utilizes biotin-streptavidin (Sav) technology to develop artificial metalloproteins (ArMs) that mimic the active sites of natural copper metalloenzymes. By engineering ArMs with aromatic residues within their secondary coordination spheres, we systematically investigate the influence of these residues on Cu reactivity and oxidant activation. We demonstrate that the placement and orientation of tyrosine relative to the Cu cofactor critically affect the oxidation outcomes upon exposure to hydrogen peroxide. A key finding is the interplay between the coordination of an active site asparagine and the incorporation of aromatic residues proximal to the artificial Cu cofactor, which are the only variants where oxidation of an engineered residues is observed. These findings underscore the importance of the secondary coordination sphere in modulating Cu center reactivity, suggest a role for amide coordination in C-H bond activation by pMMOs, and potential inactivation pathways in natural copper enzymes like LPMOs.
最近的研究揭示了金属辅因子周围局部环境的关键作用,例如颗粒甲烷单加氧酶(pMMO)中新发现的铜位点以及裂解多糖单加氧酶(LPMO)中第二配位层的芳香族残基,这些与防止氧化损伤有关。然而,这些特征仍是持续争论的主题。我们的工作利用生物素-链霉亲和素(Sav)技术开发人工金属蛋白(ArM),以模拟天然铜金属酶的活性位点。通过在二级配位层中设计带有芳香族残基的ArM,我们系统地研究了这些残基对铜反应性和氧化剂活化的影响。我们证明酪氨酸相对于铜辅因子的位置和取向在暴露于过氧化氢时对氧化结果有至关重要的影响。一个关键发现是活性位点天冬酰胺的配位与人工铜辅因子附近芳香族残基的掺入之间的相互作用,这是仅有的观察到工程化残基氧化的变体。这些发现强调了二级配位层在调节铜中心反应性方面的重要性,表明酰胺配位在pMMO激活C-H键中的作用,以及LPMO等天然铜酶中的潜在失活途径。