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基于报告蛋白分选分析和生物信息学开发一种通用的植物源线粒体靶向序列

Development of a Versatile Plant-Derived Mitochondrial Targeting Sequence Based on a Reporter Protein Sorting Analysis and Biological Information.

作者信息

Abe Naoya, Odahara Masaki, Morey Shamitha Rao, Numata Keiji

机构信息

Department of Material Chemistry, Graduate School of Engineering, Kyoto University, Katsura, Kyoto, Nishikyo-ku 615-8510, Japan.

Biomacromolecules Research Team, RIKEN Center for Sustainable Resource Science, 2-1 Hirosawa, Saitama, Wako 351-0198, Japan.

出版信息

ACS Chem Biol. 2024 Dec 20;19(12):2515-2524. doi: 10.1021/acschembio.4c00625. Epub 2024 Dec 2.

DOI:10.1021/acschembio.4c00625
PMID:39622491
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11667665/
Abstract

Methods for the delivery of exogenous substances to specific organelles are important because each organelle functions according to its own role. Specifically, mitochondria play an important role in energy production. Recently, plant mitochondrial transformation via delivery methods to mitochondria has been actively researched. Mitochondrial targeting sequences (MTSs) are essential for transporting bioactive molecules, such as nucleic acids, to mitochondria. However, the selectivity and efficacy of MTSs as carrier molecules in plants are not yet sufficient. In this study, we developed an effective MTS in plants via a quantitative comparison of the targeting functions of several MTSs. The presequence of HSP60 from , which is highly similar to that of several other model plants, showed high mitochondrial-targeting ability among the MTSs tested. This result suggests the applicability of the HSP60 presequence for MTSs in various plants. We further investigated this HSP60 presequence through stepwise shortening on the basis of secondary structure prediction, aiming to simplify synthesis and increase the solubility of the peptides. As shown by assessment of the mitochondrial targeting ability, the 15 residues from the N-terminus of the HSP60 presequence for the MTS, which is particularly conserved among various model plants, retained a targeting efficacy comparable to that of the full-length HSP60 presequence. This developed sequence from the HSP60 sequence is a promising MTS for transfection into plant mitochondria.

摘要

将外源物质递送至特定细胞器的方法很重要,因为每个细胞器都根据其自身的作用发挥功能。具体而言,线粒体在能量产生中起重要作用。最近,通过向线粒体的递送方法进行植物线粒体转化的研究十分活跃。线粒体靶向序列(MTSs)对于将生物活性分子(如核酸)运输到线粒体至关重要。然而,MTSs作为植物载体分子的选择性和功效尚不够充分。在本研究中,我们通过对几种MTSs的靶向功能进行定量比较,开发了一种有效的植物MTS。与其他几种模式植物高度相似的HSP60的前导序列,在所测试的MTSs中显示出高线粒体靶向能力。这一结果表明HSP60前导序列适用于各种植物的MTSs。我们基于二级结构预测通过逐步缩短进一步研究了该HSP60前导序列,旨在简化合成并提高肽的溶解度。通过对线粒体靶向能力的评估表明,MTS的HSP60前导序列N端的15个残基在各种模式植物中特别保守,其保留的靶向功效与全长HSP60前导序列相当。从HSP60序列开发的该序列是用于转染植物线粒体的一种有前景的MTS。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/86ab/11667665/a7e1fe6cd574/cb4c00625_0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/86ab/11667665/2a55a47ac607/cb4c00625_0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/86ab/11667665/b0c6b6524af4/cb4c00625_0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/86ab/11667665/7e62e0958c03/cb4c00625_0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/86ab/11667665/269c0952f1d9/cb4c00625_0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/86ab/11667665/7704ce46b72a/cb4c00625_0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/86ab/11667665/a7e1fe6cd574/cb4c00625_0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/86ab/11667665/2a55a47ac607/cb4c00625_0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/86ab/11667665/b0c6b6524af4/cb4c00625_0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/86ab/11667665/7e62e0958c03/cb4c00625_0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/86ab/11667665/269c0952f1d9/cb4c00625_0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/86ab/11667665/7704ce46b72a/cb4c00625_0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/86ab/11667665/a7e1fe6cd574/cb4c00625_0006.jpg

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本文引用的文献

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Accurate structure prediction of biomolecular interactions with AlphaFold 3.利用 AlphaFold 3 进行生物分子相互作用的精确结构预测。
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Plant Mitochondrial-Targeted Gene Delivery by Peptide/DNA Micelles Quantitatively Surface-Modified with Mitochondrial Targeting and Membrane-Penetrating Peptides.通过与线粒体靶向和穿膜肽定量表面修饰的肽/DNA 胶束实现植物线粒体靶向基因传递。
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Polymer-coated carbon nanotube hybrids with functional peptides for gene delivery into plant mitochondria.
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