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罕见病基因组学与精准医学。

Rare disease genomics and precision medicine.

作者信息

Hong Juhyeon, Lee Dajun, Hwang Ayoung, Kim Taekeun, Ryu Hong-Yeoul, Choi Jungmin

机构信息

Department of Biomedical Sciences, Korea University College of Medicine, Seoul, 02841, Republic of Korea.

School of Life Sciences, BK21 FOUR KNU Creative BioResearch Group, College of Natural Sciences, Kyungpook National University, Daegu, 41566, Republic of Korea.

出版信息

Genomics Inform. 2024 Dec 3;22(1):28. doi: 10.1186/s44342-024-00032-1.

DOI:10.1186/s44342-024-00032-1
PMID:39627904
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11616305/
Abstract

Rare diseases, though individually uncommon, collectively affect millions worldwide. Genomic technologies and big data analytics have revolutionized diagnosing and understanding these conditions. This review explores the role of genomics in rare disease research, the impact of large consortium initiatives, advancements in extensive data analysis, the integration of artificial intelligence (AI) and machine learning (ML), and the therapeutic implications in precision medicine. We also discuss the challenges of data sharing and privacy concerns, emphasizing the need for collaborative efforts and secure data practices to advance rare disease research.

摘要

罕见病虽然单种疾病并不常见,但在全球范围内总计影响着数百万人。基因组技术和大数据分析已经彻底改变了对这些疾病的诊断和认知。本综述探讨了基因组学在罕见病研究中的作用、大型联盟计划的影响、广泛数据分析的进展、人工智能(AI)和机器学习(ML)的整合,以及在精准医学中的治疗意义。我们还讨论了数据共享的挑战和隐私问题,强调需要通过合作努力和安全的数据实践来推进罕见病研究。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4973/11616305/36d00ac4f942/44342_2024_32_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4973/11616305/36d00ac4f942/44342_2024_32_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4973/11616305/36d00ac4f942/44342_2024_32_Fig1_HTML.jpg

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本文引用的文献

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Rare variation in non-coding regions with evolutionary signatures contributes to autism spectrum disorder risk.具有进化特征的非编码区域中的罕见变异导致自闭症谱系障碍风险增加。
Cell Genom. 2024 Aug 14;4(8):100609. doi: 10.1016/j.xgen.2024.100609. Epub 2024 Jul 16.
2
De novo variants in the RNU4-2 snRNA cause a frequent neurodevelopmental syndrome.RNU4-2 snRNA 中的新生变异导致一种常见的神经发育综合征。
Nature. 2024 Aug;632(8026):832-840. doi: 10.1038/s41586-024-07773-7. Epub 2024 Jul 11.
3
Prevalence and Characterization of GGC Repeat Expansions in Koreans: From a Hospital Cohort Analysis to a Population-Wide Study.
罕见病遗传学前沿专题文集社论
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4
Lessons from national biobank projects utilizing whole-genome sequencing for population-scale genomics.利用全基因组测序开展人群规模基因组学研究的国家生物样本库项目经验教训。
Genomics Inform. 2025 Mar 6;23(1):8. doi: 10.1186/s44342-025-00040-9.
韩国人群中GGC重复序列扩增的患病率及特征:从医院队列分析到全人群研究
Neurol Genet. 2024 May 20;10(3):e200147. doi: 10.1212/NXG.0000000000200147. eCollection 2024 Jun.
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Time to diagnosis and determinants of diagnostic delays of people living with a rare disease: results of a Rare Barometer retrospective patient survey.罕见病患者的诊断时间和诊断延迟的决定因素:罕见病晴雨表回顾性患者调查结果。
Eur J Hum Genet. 2024 Sep;32(9):1116-1126. doi: 10.1038/s41431-024-01604-z. Epub 2024 May 16.
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Korea4K: whole genome sequences of 4,157 Koreans with 107 phenotypes derived from extensive health check-ups.韩国 4K 计划:107 种表型的 4157 名韩国人全基因组序列源于广泛的健康检查。
Gigascience. 2024 Jan 2;13. doi: 10.1093/gigascience/giae014.
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