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CRISPR/Cas介导的干扰在……中的进展与应用

Advances and applications of CRISPR/Cas-mediated interference in .

作者信息

Lim Xiaohui, Zhang Congqiang, Chen Xixian

机构信息

Singapore Institute of Food and Biotechnology Innovation (SIFBI), Agency for Science Technology and Research (A∗STAR), 31 Biopolis Way, Level 6, Nanos Building, Singapore 138669, Singapore.

出版信息

Eng Microbiol. 2023 Nov 2;4(1):100123. doi: 10.1016/j.engmic.2023.100123. eCollection 2024 Mar.

Abstract

The bacterium () is one of the most widely used chassis microbes employed for the biosynthesis of numerous valuable chemical compounds. In the past decade, the metabolic engineering of has undergone significant advances, although further productivity improvements will require extensive genome modification, multi-dimensional regulation, and multiple metabolic-pathway coordination. In this context, clustered regularly interspaced short palindromic repeats (CRISPR), along with CRISPR-associated protein (Cas) and its inactive variant (dCas), have emerged as notable recombination and transcriptional regulation tools that are particularly useful for multiplex metabolic engineering in . In this review, we briefly describe the CRISPR/Cas9 technology in , and then summarize the recent advances in CRISPR/dCas9 interference (CRISPRi) systems in , particularly the strategies designed to effectively regulate gene repression and overcome retroactivity during multiplexing. Moreover, we discuss recent applications of the CRISPRi system for enhancing metabolite production in , and finally highlight the major challenges and future perspectives of this technology.

摘要

大肠杆菌()是用于生物合成众多有价值化合物的最广泛使用的底盘微生物之一。在过去十年中,大肠杆菌的代谢工程取得了显著进展,尽管进一步提高生产力将需要广泛的基因组修饰、多维调控和多条代谢途径的协调。在这种背景下,成簇规律间隔短回文重复序列(CRISPR)及其相关蛋白(Cas)和无活性变体(dCas)已成为显著的重组和转录调控工具,对大肠杆菌的多重代谢工程特别有用。在本综述中,我们简要描述了大肠杆菌中的CRISPR/Cas9技术,然后总结了大肠杆菌中CRISPR/dCas9干扰(CRISPRi)系统的最新进展,特别是为有效调控基因抑制和克服多重化过程中的追溯性而设计的策略。此外,我们讨论了CRISPRi系统在提高大肠杆菌代谢产物产量方面的最新应用,最后强调了该技术的主要挑战和未来前景。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cefa/11611006/daf6371bf542/ga1.jpg

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