• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

基于深度学习的整合网络药理学和药物-药物相互作用分析揭示栀子厚朴汤的强效抗抑郁作用。

Reveal the potent antidepressant effects of Zhi-Zi-Hou-Pu Decoction based on integrated network pharmacology and DDI analysis by deep learning.

作者信息

Zhang Zhiwen, Li Xiaojing, Huang Zihui, Pan Zhenxing, Li Lingjie, Wang Yang, Wu Siwei, Xing Yan, Xiao Guanlin, He Yan, Cai Dake, Liu Xujie

机构信息

School of Biomedical and Pharmaceutical Sciences, Guangdong University of Technology, Guangzhou, 510006, China.

Department of Pharmacy, Guangdong Provincial People's Hospital, Guangdong Academy of Medical Sciences, Southern Medical University, Guangzhou, Guangdong, 510090, China.

出版信息

Heliyon. 2024 Oct 3;10(22):e38726. doi: 10.1016/j.heliyon.2024.e38726. eCollection 2024 Nov 30.

DOI:10.1016/j.heliyon.2024.e38726
PMID:39641032
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11617927/
Abstract

BACKGROUND AND OBJECTIVE

The multi-targets and multi-components of Traditional Chinese medicine (TCM) coincide with the complex pathogenesis of depression. Zhi-Zi-Hou-Pu Decoction (ZZHPD) has been approved in clinical medication with good antidepression effects for centuries, while the mechanisms under the iceberg haven't been addressed systematically. This study explored its inner active ingredients - potent pharmacological mechanism - DDI to explore more comprehensively and deeply understanding of the complicated TCM in treatment.

METHODS

This research utilized network pharmacology combined with molecular docking to identify pharmacological targets and molecular interactions between ZZHPD and depression. Verification of major active compounds was conducted through UPLC-Q-TOF-MS/MS and assays on LPS-induced neuroblastoma cells. Additionally, the DDIMDL model, a deep learning-based approach, was used to predict DDIs, focusing on serum concentration, metabolism, effectiveness, and adverse reactions.

RESULTS

The antidepressant mechanisms of ZZHPD involve the serotonergic synapse, neuroactive ligand-receptor interaction, and dopaminergic synapse signaling pathways. Eighteen active compounds were identified, with honokiol and eriocitrin significantly modulating neuronal inflammation and promoting differentiation of neuroimmune cells through genes like COMT, PI3KCA, PTPN11, and MAPK1. DDI predictions indicated that eriocitrin's serum concentration increases when combined with hesperidin, while hesperetin's metabolism decreases with certain flavonoids. These findings provide crucial insights into the nervous system's effectiveness and potential cardiovascular or nervous system adverse reactions from core compound combinations.

CONCLUSIONS

This study provides insights into the TCM interpretation, drug compatibility or combined medication for further clinical application or potential drug pairs with a cost-effective method of integrated network pharmacology and deep learning.

摘要

背景与目的

中药的多靶点和多成分与抑郁症复杂的发病机制相契合。栀子厚朴汤(ZZHPD)在临床用药中已获认可,数百年来一直具有良好的抗抑郁效果,但其潜在机制尚未得到系统阐述。本研究探索其内在活性成分 - 强大的药理机制 - 药物 - 药物相互作用(DDI),以更全面、深入地理解中药治疗抑郁症的复杂性。

方法

本研究利用网络药理学结合分子对接来确定ZZHPD与抑郁症之间的药理靶点和分子相互作用。通过超高效液相色谱 - 四极杆飞行时间串联质谱(UPLC - Q - TOF - MS/MS)以及对脂多糖(LPS)诱导的神经母细胞瘤细胞进行实验,对主要活性化合物进行验证。此外,基于深度学习的DDIMDL模型用于预测药物 - 药物相互作用,重点关注血清浓度、代谢、有效性和不良反应。

结果

ZZHPD的抗抑郁机制涉及5 - 羟色胺能突触、神经活性配体 - 受体相互作用和多巴胺能突触信号通路。鉴定出18种活性化合物,厚朴酚和圣草枸橼苷通过儿茶酚 - O - 甲基转移酶(COMT)、磷脂酰肌醇 - 3 - 激酶催化亚基α(PI3KCA)、蛋白酪氨酸磷酸酶非受体型11(PTPN11)和丝裂原活化蛋白激酶1(MAPK1)等基因显著调节神经元炎症并促进神经免疫细胞分化。药物 - 药物相互作用预测表明,圣草枸橼苷与橙皮苷合用时血清浓度升高,而橙皮素与某些黄酮类化合物合用时代谢降低。这些发现为核心化合物组合对神经系统的有效性以及潜在的心血管或神经系统不良反应提供了关键见解。

结论

本研究通过网络药理学与深度学习相结合的经济有效方法,为中药的阐释、药物配伍或联合用药提供了见解,以用于进一步的临床应用或潜在的药物组合。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f166/11617927/092bc89165c0/gr11.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f166/11617927/d3960288ef99/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f166/11617927/c3edd300b581/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f166/11617927/6e052983eb8b/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f166/11617927/7d521c86565d/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f166/11617927/12059166dce5/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f166/11617927/8b678e8ce9d9/gr6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f166/11617927/0a428284819a/gr7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f166/11617927/f091b06883c2/gr8.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f166/11617927/3111ffc8f8c6/gr9.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f166/11617927/ac2bcd58e42e/gr10.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f166/11617927/092bc89165c0/gr11.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f166/11617927/d3960288ef99/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f166/11617927/c3edd300b581/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f166/11617927/6e052983eb8b/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f166/11617927/7d521c86565d/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f166/11617927/12059166dce5/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f166/11617927/8b678e8ce9d9/gr6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f166/11617927/0a428284819a/gr7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f166/11617927/f091b06883c2/gr8.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f166/11617927/3111ffc8f8c6/gr9.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f166/11617927/ac2bcd58e42e/gr10.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f166/11617927/092bc89165c0/gr11.jpg

相似文献

1
Reveal the potent antidepressant effects of Zhi-Zi-Hou-Pu Decoction based on integrated network pharmacology and DDI analysis by deep learning.基于深度学习的整合网络药理学和药物-药物相互作用分析揭示栀子厚朴汤的强效抗抑郁作用。
Heliyon. 2024 Oct 3;10(22):e38726. doi: 10.1016/j.heliyon.2024.e38726. eCollection 2024 Nov 30.
2
Discovery of the toxicity-related quality markers and mechanisms of Zhi-Zi-Hou-Po decoction based on Chinmedomics combined with differentially absorbed components and network pharmacology.基于整合中药药理学与差异吸收成分和网络药理学的方法发现知母-黄柏汤的毒性相关质量标志物和作用机制。
J Ethnopharmacol. 2024 Feb 10;320:117408. doi: 10.1016/j.jep.2023.117408. Epub 2023 Nov 14.
3
Integrated Network Pharmacology Analysis and Experimental Validation to Investigate the Mechanism of Zhi-Zi-Hou-Po Decoction in Depression.基于网络药理学的整合分析及实验验证探究栀子厚朴汤治疗抑郁症的作用机制
Front Pharmacol. 2021 Oct 8;12:711303. doi: 10.3389/fphar.2021.711303. eCollection 2021.
4
Discovery of the Potential Novel Pharmacodynamic Substances From Zhi-Zi-Hou-Po Decoction Based on the Concept of Co-Decoction Reaction and Analysis Strategy.基于共煎反应概念及分析策略从栀子厚朴汤中发现潜在新型药效物质
Front Pharmacol. 2022 Jan 13;12:830558. doi: 10.3389/fphar.2021.830558. eCollection 2021.
5
Integrated Screening of Effective Anti-Insomnia Fractions of Zhi-Zi-Hou-Po Decoction via and Network Pharmacology Analysis of the Underlying Pharmacodynamic Material and Mechanism.基于网络药理学的栀子厚朴汤有效抗失眠活性部位筛选及其药效物质基础与作用机制分析
ACS Omega. 2021 Mar 24;6(13):9176-9187. doi: 10.1021/acsomega.1c00445. eCollection 2021 Apr 6.
6
Identifying the effectual-combination ingredients of Zhi-zi-Hou-po decoction based on metabolic difference-oriented network regulation strategy.基于代谢差异导向的网络调控策略鉴定栀子厚朴汤的有效组合成分。
J Chromatogr B Analyt Technol Biomed Life Sci. 2021 Nov 1;1184:122980. doi: 10.1016/j.jchromb.2021.122980. Epub 2021 Oct 8.
7
Identification of absorbed components and metabolites of Zhi-Zi-Hou-Po decoction in rat plasma after oral administration by an untargeted metabolomics-driven strategy based on LC-MS.基于液相色谱-质谱联用的非靶向代谢组学驱动策略鉴定大鼠口服栀子厚朴汤后血浆中吸收成分及代谢产物
Anal Bioanal Chem. 2016 Aug;408(21):5723-5735. doi: 10.1007/s00216-016-9674-x. Epub 2016 Jun 24.
8
Uncovering pharmacological mechanisms of Zhi-Zi-Hou-Po decoction in chronic unpredictable mild stress induced rats through pharmacokinetics, monoamine neurotransmitter and neurogenesis.揭示知柏地黄汤在慢性不可预测轻度应激诱导大鼠中的药理机制:药代动力学、单胺神经递质和神经发生。
J Ethnopharmacol. 2019 Oct 28;243:112079. doi: 10.1016/j.jep.2019.112079. Epub 2019 Jul 11.
9
The Effects of Different Varieties of on the Potential Toxicity of Zhi-Zi-Hou-Po Decoction Based on Spectrum-Toxicity Correlation Analysis.基于谱-毒相关性分析的不同栀子品种对栀子柏皮汤潜在毒性的影响。
Molecules. 2019 Nov 22;24(23):4254. doi: 10.3390/molecules24234254.
10
Evaluation of the Hepatotoxicity of the Zhi-Zi-Hou-Po Decoction by Combining UPLC-Q-Exactive-MS-Based Metabolomics and HPLC-MS/MS-Based Geniposide Tissue Distribution.基于 UPLC-Q-Exactive-MS 代谢组学和 HPLC-MS/MS 栀子苷组织分布的栀子豉汤肝毒性评价。
Molecules. 2019 Jan 31;24(3):511. doi: 10.3390/molecules24030511.

引用本文的文献

1
Schaftoside Reduces Depression- and Anxiogenic-like Behaviors in Mice Depression Models.schaftoside可减轻小鼠抑郁模型中的抑郁样和焦虑样行为。
Brain Sci. 2025 Feb 24;15(3):238. doi: 10.3390/brainsci15030238.

本文引用的文献

1
Machine learning for synergistic network pharmacology: a comprehensive overview.机器学习在协同网络药理学中的应用:全面综述。
Brief Bioinform. 2023 May 19;24(3). doi: 10.1093/bib/bbad120.
2
Traditional Chinese medicine decoctions and Chinese patent medicines for the treatment of depression: Efficacies and mechanisms.中药方剂及中成药治疗抑郁症的疗效及作用机制。
J Ethnopharmacol. 2023 May 10;307:116272. doi: 10.1016/j.jep.2023.116272. Epub 2023 Feb 13.
3
Dissecting the molecular mechanisms underlying the antidepressant activities of herbal medicines through the comprehensive review of the recent literatures.
通过对近期文献的全面综述剖析草药抗抑郁活性背后的分子机制。
Front Psychiatry. 2022 Dec 22;13:1054726. doi: 10.3389/fpsyt.2022.1054726. eCollection 2022.
4
A biomedical knowledge graph-based method for drug-drug interactions prediction through combining local and global features with deep neural networks.基于生物医学知识图谱的方法,通过结合局部和全局特征与深度神经网络来预测药物-药物相互作用。
Brief Bioinform. 2022 Sep 20;23(5). doi: 10.1093/bib/bbac363.
5
The microbiota-gut-brain axis and its modulation in the therapy of depression: Comparison of efficacy of conventional drugs and traditional Chinese medicine approaches.肠道菌群-肠-脑轴及其在抑郁症治疗中的调制:传统药物与中医药方法疗效的比较。
Pharmacol Res. 2022 Sep;183:106372. doi: 10.1016/j.phrs.2022.106372. Epub 2022 Jul 28.
6
A review of machine learning approaches for drug synergy prediction in cancer.机器学习方法在癌症药物协同作用预测中的研究进展综述。
Brief Bioinform. 2022 May 13;23(3). doi: 10.1093/bib/bbac075.
7
The therapeutic potential of traditional Chinese medicine in depression: Targeting adult hippocampal neurogenesis.中药在抑郁症治疗中的潜力:以成年海马神经发生为靶点。
Phytomedicine. 2022 Apr;98:153980. doi: 10.1016/j.phymed.2022.153980. Epub 2022 Feb 4.
8
More treatment but no less depression: The treatment-prevalence paradox.更多治疗,却更少缓解:治疗-患病率悖论。
Clin Psychol Rev. 2022 Feb;91:102111. doi: 10.1016/j.cpr.2021.102111. Epub 2021 Dec 11.
9
Mol* Viewer: modern web app for 3D visualization and analysis of large biomolecular structures.Mol* Viewer:用于大型生物分子结构的 3D 可视化和分析的现代 Web 应用程序。
Nucleic Acids Res. 2021 Jul 2;49(W1):W431-W437. doi: 10.1093/nar/gkab314.
10
New Insights into the Metabolism of the Flavanones Eriocitrin and Hesperidin: A Comparative Human Pharmacokinetic Study.黄酮类化合物圣草次苷和橙皮苷代谢的新见解:一项人体药代动力学对比研究。
Antioxidants (Basel). 2021 Mar 11;10(3):435. doi: 10.3390/antiox10030435.