Huang Ziyuan, Han Zenglei, Zheng Kairong, Zhang Yidan, Liang Yanjun, Zhu Xiao, Zhou Jiajun
Department of Clinical Laboratory, The First Affiliated Hospital of Wannan Medical College (Yijishan Hospital of Wannan Medical College), Wuhu, China.
The Second Affiliated Hospital, Guangdong Medical University, Zhanjiang, China.
Medicine (Baltimore). 2024 Dec 6;103(49):e40629. doi: 10.1097/MD.0000000000040629.
Numerous studies have substantiated the pivotal role of long non-coding RNAs (lncRNAs) in the progression of non-small cell lung cancer (NSCLC) and the prognosis of afflicted patients. Notably, individuals with NSCLC may exhibit heightened vulnerability to the novel coronavirus disease (COVID-19), resulting in a more unfavorable prognosis subsequent to infection. Nevertheless, the impact of COVID-19-related lncRNAs on NSCLC remains unexplored. The aim of our study was to develop an innovative model that leverages COVID-19-related lncRNAs to optimize the prognosis of NSCLC patients. Pertinent genes and patient data were procured from reputable databases, including TCGA, Finngen, and RGD. Through co-expression analysis, we identified lncRNAs associated with COVID-19. Subsequently, we employed univariate, LASSO, and multivariate COX regression techniques to construct a risk model based on these COVID-19-related lncRNAs. The validity of the risk model was assessed using KM analysis, PCA, and ROC. Furthermore, functional enrichment analysis was conducted to elucidate the functional pathways linked to the identified lncRNAs. Lastly, we performed TME analysis and predicted the drug sensitivity of the model. Based on risk scores, patients were categorized into high- and low-risk subgroups, revealing distinct clinicopathological factors, immune pathways, and chemotherapy sensitivity between the subgroups. Four COVID-19-related lncRNAs (AL161431.1, AC079949.1, AC123595.1, and AC108136.1) were identified as potential candidates for constructing prognostic prediction models for NSCLC. We also observed a positive correlation between risk score and MDSC, exclusion, and CAF. Additionally, two immune pathways associated with high-risk and low-risk subgroups were identified. Our findings further support the association between COVID-19 infection and neuroactive ligand-receptor interaction, as well as steroid metabolism in NSCLC. Moreover, we identified several highly sensitive chemotherapy drugs for NSCLC treatment. The developed model holds significant value in predicting the prognosis of NSCLC patients and guiding treatment decisions.
众多研究证实了长链非编码RNA(lncRNAs)在非小细胞肺癌(NSCLC)进展及患病患者预后中所起的关键作用。值得注意的是,NSCLC患者可能对新型冠状病毒病(COVID-19)表现出更高的易感性,导致感染后预后更差。然而,与COVID-19相关的lncRNAs对NSCLC的影响仍未得到探索。我们研究的目的是开发一种创新模型,利用与COVID-19相关的lncRNAs来优化NSCLC患者的预后。相关基因和患者数据来自包括TCGA、Finngen和RGD在内的知名数据库。通过共表达分析,我们确定了与COVID-19相关的lncRNAs。随后,我们采用单变量、LASSO和多变量COX回归技术,基于这些与COVID-19相关的lncRNAs构建了一个风险模型。使用KM分析、PCA和ROC评估风险模型的有效性。此外,进行了功能富集分析以阐明与所确定的lncRNAs相关的功能途径。最后,我们进行了肿瘤微环境(TME)分析并预测了模型的药物敏感性。根据风险评分,患者被分为高风险和低风险亚组,揭示了亚组之间不同的临床病理因素、免疫途径和化疗敏感性。四个与COVID-19相关的lncRNAs(AL161431.1、AC079949.1、AC123595.1和AC108136.1)被确定为构建NSCLC预后预测模型的潜在候选者。我们还观察到风险评分与髓系来源的抑制细胞(MDSC)、排除和癌相关成纤维细胞(CAF)之间存在正相关。此外,还确定了与高风险和低风险亚组相关的两条免疫途径。我们的研究结果进一步支持了COVID-19感染与NSCLC中神经活性配体-受体相互作用以及类固醇代谢之间的关联。此外,我们确定了几种用于NSCLC治疗的高度敏感化疗药物。所开发的模型在预测NSCLC患者的预后和指导治疗决策方面具有重要价值。