Klapper Martin, Stallforth Pierre
Leibniz Institute for Natural Product Research and Infection Biology-Hans Knöll Institute, Department of Paleobiotechnology, Beutenbergstraße 11a, D-07745 Jena, Germany.
Friedrich Schiller University Jena, Institute for Organic Chemistry and Macromolecular Chemistry, Humboldtstraße 10, D-07743 Jena, Germany.
Microlife. 2024 Nov 19;5:uqae023. doi: 10.1093/femsml/uqae023. eCollection 2024.
Microbial natural products-low molecular weight compounds biosynthesized by microorganisms-form the foundation of important modern therapeutics, including antibiotics, immunomodulators, and anti-cancer agents. This perspective discusses and contrasts two emerging approaches for uncovering natural products of the past. On the one hand, ancestral sequence reconstruction allows recreating biosynthetic pathways that date back hundreds of millions of years. On the other hand, sequencing and assembly of ancient DNA reveals the biosynthetic potential of ancient microbial communities up to 100 000 years. Together, these approaches unveil an otherwise hidden reservoir of functional and structural molecular diversity. They also offer new opportunities to study the biological function and evolution of these molecules within an archaeological context.
微生物天然产物——由微生物生物合成的低分子量化合物——构成了重要现代疗法的基础,包括抗生素、免疫调节剂和抗癌药物。本文讨论并对比了两种挖掘过去天然产物的新兴方法。一方面,祖先序列重建能够重现数亿年前的生物合成途径。另一方面,古代DNA的测序和组装揭示了距今10万年的古代微生物群落的生物合成潜力。这些方法共同揭示了一个原本隐藏的功能和结构分子多样性宝库。它们还为在考古背景下研究这些分子的生物学功能和进化提供了新机会。