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植物-微生物相互作用中细胞外囊泡分离的实用建议:关注点、考量因素及结论

Practical advice for extracellular vesicle isolation in plant-microbe interactions: Concerns, considerations, and conclusions.

作者信息

Thieron Hannah, Krassini Laura, Kwon Seomun, Fricke Sebastian, Nasfi Sabrine, Oberkofler Lorenz, Ruf Alessa, Kehr Julia, Kogel Karl-Heinz, Weiberg Arne, Feldbrügge Michael, Robatzek Silke, Panstruga Ralph

机构信息

Unit for Plant Molecular Cell Biology, Institute for Biology I, RWTH Aachen University, Aachen, Germany.

LMU Munich Biocenter, Ludwig-Maximilian-University of Munich, Munich, Germany.

出版信息

J Extracell Vesicles. 2024 Dec;13(12):e70022. doi: 10.1002/jev2.70022.

DOI:10.1002/jev2.70022
PMID:39665314
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11635479/
Abstract

In recent years, extracellular vesicles (EVs) have emerged as novel key players in plant-microbe interactions. While it is immensely useful to draw on the established "minimal information for studies of extracellular vesicles" (MISEV) guidelines and precedents in mammalian systems, working with plants and their associated microbes poses specific challenges. To navigate researchers through these obstacles, we offer detailed step-by-step suggestions for those embarking on EV research in the context of plant-microbe interactions. The advice is based on recent publications and our collective experience from the diverse plant and microbe systems studied in a dedicated research consortium. We provide considerations for experimental design, optimization, quality control, and recommendations on how to increase yield, purity, and reproducibility of EV isolation. With this perspective article, we aim not only to assist researchers in our field but also to promote discussions on plant and microbe EVs in the broader EV community.

摘要

近年来,细胞外囊泡(EVs)已成为植物 - 微生物相互作用中的新型关键参与者。虽然借鉴哺乳动物系统中已确立的“细胞外囊泡研究的最小信息”(MISEV)指南和先例非常有用,但研究植物及其相关微生物存在特定挑战。为帮助研究人员克服这些障碍,我们为那些在植物 - 微生物相互作用背景下开展细胞外囊泡研究的人员提供详细的逐步建议。这些建议基于近期的出版物以及我们在一个专门研究联盟中对多种植物和微生物系统的集体经验。我们提供了实验设计、优化、质量控制方面的注意事项,以及关于如何提高细胞外囊泡分离的产量、纯度和可重复性的建议。通过这篇观点文章,我们不仅旨在协助本领域的研究人员,还旨在促进更广泛的细胞外囊泡领域对植物和微生物细胞外囊泡的讨论。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8a61/11635479/d2c677baa9e0/JEV2-13-e70022-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8a61/11635479/d2c677baa9e0/JEV2-13-e70022-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8a61/11635479/d2c677baa9e0/JEV2-13-e70022-g001.jpg

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本文引用的文献

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Cell culture-derived extracellular vesicles: Considerations for reporting cell culturing parameters.细胞培养衍生的细胞外囊泡:报告细胞培养参数的注意事项。
J Extracell Biol. 2023 Oct 16;2(10):e115. doi: 10.1002/jex2.115. eCollection 2023 Oct.
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Dual roles of the conditional extracellular vesicles derived from biofilms: Promoting and inhibiting bacterial biofilm growth.生物膜来源的条件性细胞外囊泡的双重作用:促进和抑制细菌生物膜生长。
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细胞外囊泡研究的最低信息要求(MISEV2023):从基础到先进方法。
J Extracell Vesicles. 2024 Feb;13(2):e12404. doi: 10.1002/jev2.12404.
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Mitochondria as secretory organelles and therapeutic cargos.线粒体作为分泌细胞器和治疗载体。
Exp Mol Med. 2024 Feb;56(1):66-85. doi: 10.1038/s12276-023-01141-7. Epub 2024 Jan 4.
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A fungal RNA-dependent RNA polymerase is a novel player in plant infection and cross-kingdom RNA interference.真菌 RNA 依赖的 RNA 聚合酶是植物侵染和跨领域 RNA 干扰的新角色。
PLoS Pathog. 2023 Dec 20;19(12):e1011885. doi: 10.1371/journal.ppat.1011885. eCollection 2023 Dec.
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Plant mRNAs move into a fungal pathogen via extracellular vesicles to reduce infection.植物 mRNAs 通过细胞外囊泡进入真菌病原体,以减少感染。
Cell Host Microbe. 2024 Jan 10;32(1):93-105.e6. doi: 10.1016/j.chom.2023.11.020. Epub 2023 Dec 15.
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The Effect of Leaf Plasticity on the Isolation of Apoplastic Fluid from Leaves of Tartary Buckwheat Plants Grown and .叶可塑性对从种植的苦荞植株叶片中分离质外体汁液的影响 以及 。 你提供的原文似乎不太完整,最后的“and.”后面应该还有内容。
Plants (Basel). 2023 Nov 30;12(23):4048. doi: 10.3390/plants12234048.
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The extracellular vesicle proteomes of Sorghum bicolor and Arabidopsis thaliana are partially conserved.高粱和拟南芥细胞外囊泡蛋白质组部分保守。
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