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EF-net:用于从CT图像中分割新冠肺炎肺部感染的精确边缘分割方法。

EF-net: Accurate edge segmentation for segmenting COVID-19 lung infections from CT images.

作者信息

Zhong Wenjin, Zhang Hanwen

机构信息

University of New South Wales, Australia.

出版信息

Heliyon. 2024 Nov 20;10(23):e40580. doi: 10.1016/j.heliyon.2024.e40580. eCollection 2024 Dec 15.

Abstract

Despite advances in modern medicine including the use of computed tomography for detecting COVID-19, precise identification and segmentation of lesions remain a significant challenge owing to indistinct boundaries and low degrees of contrast between infected and healthy lung tissues. This study introduces a novel model called the edge-based dual-parallel attention (EDA)-guided feature-filtering network (EF-Net), specifically designed to accurately segment the edges of COVID-19 lesions. The proposed model comprises two modules: an EDA module and a feature-filtering module (FFM). EDA efficiently extracts structural and textural features from low-level features, enabling the precise identification of lesion boundaries. FFM receives semantically rich features from a deep-level encoder and integrates features with abundant texture and contour information obtained from the EDA module. After filtering through a gating mechanism of the FFM, the EDA features are fused with deep-level features, yielding features rich in both semantic and textural information. Experiments demonstrate that our model outperforms existing models including Inf_Net, GFNet, and BSNet considering various metrics, offering better and clearer segmentation results, particularly for segmenting lesion edges. Moreover, superior performance on the three datasets is achieved, with dice coefficients of 98.1, 97.3, and 72.1 %.

摘要

尽管现代医学取得了进步,包括使用计算机断层扫描来检测新型冠状病毒肺炎(COVID-19),但由于病变边界不清晰以及感染的肺组织与健康肺组织之间的对比度较低,病变的精确识别和分割仍然是一项重大挑战。本研究引入了一种名为基于边缘的双并行注意力(EDA)引导的特征过滤网络(EF-Net)的新型模型,专门设计用于精确分割COVID-19病变的边缘。所提出的模型包括两个模块:一个EDA模块和一个特征过滤模块(FFM)。EDA从低级特征中有效提取结构和纹理特征,从而能够精确识别病变边界。FFM从深层编码器接收语义丰富的特征,并将其与从EDA模块获得的具有丰富纹理和轮廓信息的特征进行整合。经过FFM的门控机制过滤后,EDA特征与深层特征融合,产生富含语义和纹理信息的特征。实验表明,考虑到各种指标,我们的模型优于包括Inf_Net、GFNet和BSNet在内的现有模型,提供了更好、更清晰的分割结果,特别是在分割病变边缘方面。此外,在三个数据集上均取得了优异的性能,骰子系数分别为98.1%、97.3%和72.1%。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a4da/11635652/bc504eae6b23/gr1.jpg

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