Capodimonte Lucia, Meireles Fernando Teixeira Pinto, Bahr Guillermo, Bonomo Robert A, Dal Peraro Matteo, López Carolina, Vila Alejandro J
Instituto de Biología Molecular y Celular de Rosario (CONICET IBR -UNR), Rosario, Argentina.
Área Biofísica, Facultad de Ciencias Bioquímicas y Farmacéuticas, Universidad Nacional de Rosario, Rosario, Santa Fe, Argentina.
mBio. 2025 Feb 5;16(2):e0334324. doi: 10.1128/mbio.03343-24. Epub 2024 Dec 13.
β-lactamases from Gram-negative bacteria are generally regarded as soluble, periplasmic enzymes. NDMs have been exceptionally characterized as lipoproteins anchored to the outer membrane. A bioinformatics study on all sequenced β-lactamases was performed that revealed a predominance of putative lipidated enzymes in the Class D OXAs. Namely, 60% of the OXA Class D enzymes contain a lipobox sequence in their signal peptide, that is expected to trigger lipidation and membrane anchoring. This contrasts with β-lactamases from other classes, which are predicted to be mostly soluble proteins. Almost all (>99%) putative lipidated OXAs are present in spp. Importantly, we further demonstrate that OXA-23 and OXA-24/40 are lipidated, membrane-bound proteins in . In contrast, OXA-48 (commonly produced by Enterobacterales) lacks a lipobox and is a soluble protein. Outer membrane vesicles (OMVs) from cells expressing OXA-23 and OXA-24/40 contain these enzymes in their active form. Moreover, OXA-loaded OMVs were able to protect , , and cells susceptible to piperacillin and imipenem. These results permit us to conclude that membrane binding is a bacterial host-specific phenomenon in OXA enzymes. These findings reveal that membrane-bound β-lactamases are more common than expected and support the hypothesis that OMVs loaded with lipidated β-lactamases are vehicles for antimicrobial resistance and its dissemination. This advantage could be crucial in polymicrobial infections, in which spp. are usually involved, and underscore the relevance of identifying the cellular localization of lactamases to better understand their physiology and target them.IMPORTANCEβ-lactamases represent the main mechanism of antimicrobial resistance in Gram-negative pathogens. Their catalytic function (cleaving β-lactam antibiotics) occurs in the bacterial periplasm, where they are commonly reported as soluble proteins. A bioinformatic analysis reveals a significant number of putative lipidated β-lactamases, expected to be attached to the outer bacterial membrane. Notably, 60% of Class D OXA β-lactamases (all from spp.) are predicted as membrane-anchored proteins. We demonstrate that two clinically relevant carbapenemases, OXA-23 and OXA-24/40, are membrane-bound proteins in . This cellular localization favors the secretion of these enzymes into outer membrane vesicles that transport them outside the boundaries of the cell. β-lactamase-loaded vesicles can protect populations of antibiotic-susceptible bacteria, enabling them to thrive in the presence of β-lactam antibiotics. The ubiquity of this phenomenon suggests that it may have influenced the dissemination of resistance mediated by spp., particularly in polymicrobial infections, being a potent evolutionary advantage.
革兰氏阴性菌产生的β-内酰胺酶通常被认为是可溶性的周质酶。NDMs则特别被鉴定为锚定在外膜上的脂蛋白。我们对所有已测序的β-内酰胺酶进行了一项生物信息学研究,结果显示D类OXA酶中推定的脂化酶占主导地位。具体而言,60%的D类OXA酶在其信号肽中含有一个脂盒序列,预计该序列会引发脂化和膜锚定。这与其他类别的β-内酰胺酶形成对比,其他类别的β-内酰胺酶预计大多是可溶性蛋白。几乎所有(>99%)推定的脂化OXA酶都存在于某菌属中。重要的是,我们进一步证明OXA-23和OXA-24/40在某菌属中是脂化的膜结合蛋白。相比之下,OXA-48(通常由肠杆菌科细菌产生)缺乏脂盒且是一种可溶性蛋白。表达OXA-23和OXA-24/40的某菌属细胞产生的外膜囊泡(OMV)中含有呈活性形式的这些酶。此外,装载有OXA的OMV能够保护对哌拉西林和亚胺培南敏感的某菌属、另一菌属和又一菌属细胞。这些结果使我们得出结论,膜结合是OXA酶中一种细菌宿主特异性现象。这些发现表明,膜结合的β-内酰胺酶比预期的更常见,并支持这样一种假说,即装载有脂化β-内酰胺酶的OMV是抗菌药物耐药性及其传播的载体。这一优势在通常涉及某菌属的多微生物感染中可能至关重要,并强调了确定β-内酰胺酶细胞定位以更好地了解其生理学特性并将其作为靶点的相关性。重要性β-内酰胺酶是革兰氏阴性病原体中抗菌药物耐药性的主要机制。它们的催化功能(裂解β-内酰胺抗生素)发生在细菌周质中,在那里它们通常被报道为可溶性蛋白。一项生物信息学分析揭示了大量推定的脂化β-内酰胺酶,预计它们附着在细菌外膜上。值得注意的是,60%的D类OXAβ-内酰胺酶(均来自某菌属)被预测为膜锚定蛋白。我们证明,两种具有临床相关性的碳青霉烯酶OXA-23和OXA-24/40在某菌属中是膜结合蛋白。这种细胞定位有利于这些酶分泌到外膜囊泡中,进而将它们运输到细胞边界之外。装载有β-内酰胺酶的囊泡可以保护对抗生素敏感的细菌群体,使它们能够在β-内酰胺抗生素存在的情况下存活。这种现象的普遍性表明,它可能影响了由某菌属介导的耐药性传播,特别是在多微生物感染中,这是一种强大的进化优势。