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在具有生物医学和生物技术重要性的真菌属中,物种多样性和分布的全球模式

Global patterns of species diversity and distribution in the biomedically and biotechnologically important fungal genus .

作者信息

Riedling Olivia L, David Kyle T, Rokas Antonis

机构信息

Department of Biological Sciences, Vanderbilt University, Nashville, TN, USA.

Evolutionary Studies Initiative, Vanderbilt University, Nashville, TN, USA.

出版信息

bioRxiv. 2024 Dec 3:2024.11.29.626055. doi: 10.1101/2024.11.29.626055.

Abstract

fungi are key producers of pharmaceuticals, enzymes, and food products and exhibit diverse lifestyles, ranging from saprophytes to opportunistic pathogens. To improve understanding of species diversity, identify key environmental factors influencing their geographic distributions, and estimate the impact of future climate change, we trained a random forest machine learning classifier on 30,542 terrestrial occurrence records for 176 species (~40% of known species in the genus) and 96 environmental variables. We found that regions with high species diversity are concentrated in temperate forests, which suggests that areas with mild seasonal variation may serve as diversity hotspots. Species range estimates revealed extensive variability, both within and across taxonomic sections; while some species are cosmopolitan, others have more restricted ranges. Furthermore, range overlap between species is generally low. The top predictors of mean species richness were the index of cumulative human impact and five bioclimatic factors, such as temperature and temperate vs non-temperate ecoregions. Our future climate analyses revealed considerable variation in species range estimates in response to changing climates; some species ranges are predicted to expand (e.g., the food spoilage and mycotoxin-producing ), and others are predicted to contract or remain stable. Notably, the predicted range of the major pathogen was predicted to decrease in response to climate change, whereas the range of the major pathogen was predicted to increase and gradually decrease. Our findings reveal how both natural and human factors influence species ranges and highlight their ecological diversity, including the diversity of their responses to changing climates, which is of relevance to pathogen and mycotoxin risk assessment.

摘要

真菌是药物、酶和食品的关键生产者,呈现出多样的生活方式,从腐生菌到机会性病原体。为了增进对物种多样性的理解、确定影响其地理分布的关键环境因素并估计未来气候变化的影响,我们基于176个物种(约占该属已知物种的40%)的30542条陆地出现记录和96个环境变量训练了一个随机森林机器学习分类器。我们发现,物种多样性高的地区集中在温带森林,这表明季节性变化温和的地区可能是多样性热点。物种分布范围估计显示,在分类群内部和之间都存在广泛的变异性;一些物种是世界性的,而另一些物种的分布范围则更受限制。此外,物种之间的分布范围重叠通常较低。平均物种丰富度的首要预测因素是累积人类影响指数和五个生物气候因素,如温度以及温带与非温带生态区。我们对未来气候的分析表明,随着气候的变化,物种分布范围估计存在相当大的差异;一些物种的分布范围预计会扩大(例如,导致食物腐败和产生霉菌毒素的物种),而另一些物种的分布范围预计会缩小或保持稳定。值得注意的是,主要病原体的预测分布范围预计会因气候变化而减少,而主要病原体的分布范围预计会增加并逐渐减少。我们的研究结果揭示了自然和人为因素如何影响物种分布范围,并突出了它们的生态多样性,包括它们对气候变化反应的多样性,这与病原体和霉菌毒素风险评估相关。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1a8a/11642779/6e5f13f9f8de/nihpp-2024.11.29.626055v1-f0001.jpg

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