从堪察加半岛生长的鲍里斯根瘤中分离出的非根瘤菌菌株sp. 709的全基因组序列。
Whole-genome sequence of non-rhizobial strain sp. 709 isolated from the root nodule of Borris., growing on the Kamchatka Peninsula.
作者信息
Guro Polina, Kuznetsova Irina, Sazanova Anna, Belimov Andrey, Safronova Vera
机构信息
All-Russia Research Institute for Agricultural Microbiology (ARRIAM), St.-Petersburg, Russia.
出版信息
Microbiol Resour Announc. 2025 Jan 16;14(1):e0092324. doi: 10.1128/mra.00923-24. Epub 2024 Dec 17.
Abstract
We report the whole-genome sequence of the non-rhizobial endosymbiotic bacteria sp. strain 709, which was isolated from the root nodule of Borris. on the Kamchatka Peninsula, Russia. The genome consists of one chromosome and one plasmid with a total length of 6,359,564 bp and 61.5% of GC content.
摘要
我们报告了非根瘤菌内共生细菌sp. 菌株709的全基因组序列，该菌株是从俄罗斯堪察加半岛鲍里斯的根瘤中分离出来的。基因组由一条染色体和一个质粒组成，全长6,359,564 bp，GC含量为61.5%。
相似文献
1
Whole-genome sequence of non-rhizobial strain sp. 709 isolated from the root nodule of Borris., growing on the Kamchatka Peninsula.从堪察加半岛生长的鲍里斯根瘤中分离出的非根瘤菌菌株sp. 709的全基因组序列。
Microbiol Resour Announc. 2025 Jan 16;14(1):e0092324. doi: 10.1128/mra.00923-24. Epub 2024 Dec 17.
2
Whole-genome sequence of the non-rhizobial root nodule endophyte sp. strain 685 isolated from the root nodule of Bunge., growing on the Kamchatka Peninsula.从堪察加半岛生长的 Bunge. 根瘤中分离出的非根瘤菌根瘤内生菌 sp. 菌株 685 的全基因组序列。
Microbiol Resour Announc. 2024 Feb 15;13(2):e0103323. doi: 10.1128/mra.01033-23. Epub 2024 Jan 11.
3
Whole-Genome Sequence of Rhizobacterium sp. Strain 7/4-4, Isolated from the Root Nodule of Astragalus tugarinovii Basil Growing in the Russian Arctic.从生长于俄罗斯北极地区的土库曼黄耆根瘤中分离出的根瘤菌属菌株7/4-4的全基因组序列
Microbiol Resour Announc. 2023 Jun 20;12(6):e0014123. doi: 10.1128/mra.00141-23. Epub 2023 May 15.
4
Draft Genome Sequence of sp. Strain 32-5/1, Isolated from Vicia cracca L. Root Nodules in the Russian Arctic.从俄罗斯北极地区的广布野豌豆根瘤中分离出的sp. 菌株32-5/1的基因组序列草图
Microbiol Resour Announc. 2023 Jun 20;12(6):e0028723. doi: 10.1128/mra.00287-23. Epub 2023 May 11.
5
The complete and circular genome of nitrogen-fixing sp. AaZ17, isolated from the root nodule of growing in a lead- and zinc-abandoned mine in Morocco.从摩洛哥一个铅锌废弃矿山生长的[植物名称]根瘤中分离出的固氮[菌种名称]AaZ17的完整环状基因组。 （注：原文中“nitrogen-fixing sp.”和“ growing in...”部分信息缺失，以上是根据已有内容尽量完整的翻译）
Microbiol Resour Announc. 2025 Apr 10;14(4):e0123424. doi: 10.1128/mra.01234-24. Epub 2025 Feb 27.
6
Whole genome analysis for plant growth promotion profiling of CPHN2, a non-rhizobial nodule endophyte.对非根瘤菌根瘤内生菌CPHN2促进植物生长特性的全基因组分析。
Front Microbiol. 2022 Nov 7;13:998821. doi: 10.3389/fmicb.2022.998821. eCollection 2022.
7
Draft genome sequence of type strain HBR26 and description of sp. nov.模式菌株HBR26的基因组草图序列及新种描述
Stand Genomic Sci. 2017 Jan 26;12:14. doi: 10.1186/s40793-017-0220-z. eCollection 2017.
8
Genome sequence of the Ornithopus/Lupinus-nodulating Bradyrhizobium sp. strain WSM471.
Stand Genomic Sci. 2013 Dec 15;9(2):254-63. doi: 10.4056/sigs.4498256. eCollection 2013 Dec 20.
9
Rhizobial Microsymbionts of Kamchatka Species Possess Genes of the Type III and VI Secretion Systems, Which Can Affect the Development of Symbiosis.堪察加物种的根瘤菌微生物共生体拥有 III 型和 VI 型分泌系统的基因，这些基因可能会影响共生关系的发展。
Mol Plant Microbe Interact. 2020 Oct;33(10):1232-1241. doi: 10.1094/MPMI-05-20-0114-R. Epub 2020 Sep 2.
10
sp. nov., a heavy-metal-tolerant bacterium isolated from garden soil.新种，一种从花园土壤中分离出的耐重金属细菌。
Int J Syst Evol Microbiol. 2024 Jan;74(1). doi: 10.1099/ijsem.0.006238.
本文引用的文献
1
sp. nov., a heavy-metal-tolerant bacterium isolated from garden soil.新种，一种从花园土壤中分离出的耐重金属细菌。
Int J Syst Evol Microbiol. 2024 Jan;74(1). doi: 10.1099/ijsem.0.006238.
2
Multifaceted photoreceptor compositions in dual phototrophic systems - A genomic analysis.双光合生物系统中的多功能光受体组成 - 基因组分析。
J Mol Biol. 2024 Mar 1;436(5):168412. doi: 10.1016/j.jmb.2023.168412. Epub 2023 Dec 21.
3
Potential Rhodopsin- and Bacteriochlorophyll-Based Dual Phototrophy in a High Arctic Glacier.高北极冰川中潜在的视蛋白和细菌叶绿素双重光合作用。
mBio. 2020 Nov 24;11(6):e02641-20. doi: 10.1128/mBio.02641-20.
4
Assembly of long, error-prone reads using repeat graphs.使用重复图组装长的、易错的读取。
Nat Biotechnol. 2019 May;37(5):540-546. doi: 10.1038/s41587-019-0072-8. Epub 2019 Apr 1.
5
NanoPack: visualizing and processing long-read sequencing data.NanoPack：可视化和处理长读测序数据。
Bioinformatics. 2018 Aug 1;34(15):2666-2669. doi: 10.1093/bioinformatics/bty149.
6
NCBI prokaryotic genome annotation pipeline.美国国立生物技术信息中心原核生物基因组注释管道
Nucleic Acids Res. 2016 Aug 19;44(14):6614-24. doi: 10.1093/nar/gkw569. Epub 2016 Jun 24.
7
JSpeciesWS: a web server for prokaryotic species circumscription based on pairwise genome comparison.JSpeciesWS：一个基于成对基因组比较进行原核生物物种界定的网络服务器。
Bioinformatics. 2016 Mar 15;32(6):929-31. doi: 10.1093/bioinformatics/btv681. Epub 2015 Nov 16.
8
Extra-slow-growing Tardiphaga strains isolated from nodules of Vavilovia formosa (Stev.) Fed.从美丽野豌豆（Stev.）Fed.根瘤中分离出的极慢生长的迟缓食菌菌株
Arch Microbiol. 2015 Sep;197(7):889-98. doi: 10.1007/s00203-015-1122-3. Epub 2015 May 27.
9
Bosea vaviloviae sp. nov., a new species of slow-growing rhizobia isolated from nodules of the relict species Vavilovia formosa (Stev.) Fed.瓦维洛夫博斯氏菌新种，一种从残遗物种福尔摩沙扁蓿豆（Stev.）Fed. 的根瘤中分离出的生长缓慢的根瘤菌新物种。
Antonie Van Leeuwenhoek. 2015 Apr;107(4):911-20. doi: 10.1007/s10482-015-0383-9. Epub 2015 Jan 22.
10
QUAST: quality assessment tool for genome assemblies.QUAST：基因组组装质量评估工具。
Bioinformatics. 2013 Apr 15;29(8):1072-5. doi: 10.1093/bioinformatics/btt086. Epub 2013 Feb 19.
Zotero 插件