Lazar Anna, Griffiths Robert I, Goodall Tim, Norton Lisa R, Mushinski Ryan M, Bending Gary D
School of Life Sciences, The University of Warwick, Coventry, CV4 7AL, UK.
School of Natural Sciences, Bangor University, Bangor, LL57 2UW, UK.
Environ Microbiome. 2024 Dec 18;19(1):111. doi: 10.1186/s40793-024-00646-6.
The genus Tetracladium has historically been regarded as an aquatic hyphomycete. However, sequencing of terrestrial ecosystems has shown that Tetracladium species might also be terrestrial soil and plant-inhabiting fungi. The diversity of Tetracladium species, their distribution across ecosystems, and the factors that shape community composition remain largely unknown. Using internal transcribed spacer (ITS) amplicon sequencing, we investigated the spatial distribution of Tetracladium in 970 soil samples representing the major ecosystems found across the British landscape. Species of the genus were found in 57% of the samples and across all vegetation types. The Tetracladium sequences we recovered included species common in aquatic ecosystems. However, we found five additional clades that clustered with environmental sequences previously found in terrestrial environments. The community composition of the Tetracladium OTUs was mainly related to vegetation type and soil pH. Strikingly, both taxon richness and overall abundance were highest in arable soils and showed positive relationships with soil pH. T. maxilliforme and a taxon of environmental sequences, Tetracladium group 1, was the biggest group, had the most relative abundance across ecosystems and was found in all vegetation types. Overall, this study provides insights into the community composition patterns of Tetracladium in terrestrial ecosystems and highlights the importance of vegetation characteristics in shaping Tetracladium communities.
历史上,四枝孢属一直被视为水生丝状真菌。然而,对陆地生态系统的测序表明,四枝孢属物种也可能是栖息于陆地土壤和植物中的真菌。四枝孢属物种的多样性、它们在不同生态系统中的分布以及影响群落组成的因素在很大程度上仍然未知。我们利用内转录间隔区(ITS)扩增子测序技术,调查了代表英国各地主要生态系统的970份土壤样本中四枝孢属的空间分布情况。在57%的样本以及所有植被类型中都发现了该属的物种。我们获得的四枝孢属序列包括在水生生态系统中常见的物种。然而,我们还发现了另外五个分支,它们与之前在陆地环境中发现的环境序列聚类在一起。四枝孢属操作分类单元(OTU)的群落组成主要与植被类型和土壤pH值有关。引人注目的是,分类单元丰富度和总体丰度在耕地土壤中最高,并且与土壤pH值呈正相关。最大四枝孢和一个环境序列分类单元,即四枝孢属第1组,是最大的组,在所有生态系统中的相对丰度最高,并且在所有植被类型中都有发现。总体而言,这项研究为陆地生态系统中四枝孢属的群落组成模式提供了见解,并强调了植被特征在塑造四枝孢属群落中的重要性。