Kidane Medhanie, Hoffman Rene M, Wolfe-Demarco Jennifer K, Huang Ting-Yu, Teng Chi-Ling, Samanta Saheli, Gonzalez Lira Luis M, Lin-Jones Jennifer, Pallares Gabriel, Lamerdin Jane E, Servant Nicole B, Lee Chun-Yao, Yang Chao-Tsung, Bernatchez Jean A
Research and Development and Technology Transfer, Eurofins DiscoverX, LLC, 11180 Roselle Street Suite D, San Diego, California 92121, United States.
Research and Development, Eurofins DiscoverX Products, LLC, 42501 Albrae Street, Fremont, California 94538, United States.
ACS Pharmacol Transl Sci. 2024 Dec 2;7(12):3921-3934. doi: 10.1021/acsptsci.4c00450. eCollection 2024 Dec 13.
KRAS is an important oncogenic driver which is mutated in numerous cancers. Recent advances in the selective targeting of KRAS mutants via small molecule inhibitors and targeted protein degraders have generated an increase in research activity in this area in recent years. As such, there is a need for new assay platforms to profile next generation inhibitors which improve on the potency and selectivity of existing drug candidates, while evading the emergence of resistance. Here, we describe the development of a new panel of biochemical and cell-based assays to evaluate the binding and function of known chemical entities targeting mutant KRAS. Our assay panels generated selectivity profiles and quantitative binding interaction dissociation constants for small molecules and degraders against wild type, G12C, G12D, and G12V KRAS, which were congruent with published data. These assays can be leveraged for additional mutants of interest beyond those described in this study, using both overexpressed cell-free systems and cell-based systems with endogenous protein levels.
KRAS是一种重要的致癌驱动因子,在众多癌症中发生突变。近年来,通过小分子抑制剂和靶向蛋白降解剂对KRAS突变体进行选择性靶向的研究取得了进展,这使得该领域的研究活动有所增加。因此,需要新的检测平台来分析下一代抑制剂,这些抑制剂要在提高现有候选药物的效力和选择性的同时,避免耐药性的出现。在此,我们描述了一组新的基于生化和细胞的检测方法的开发,以评估靶向突变型KRAS的已知化学实体的结合和功能。我们的检测方法生成了小分子和降解剂针对野生型、G12C、G12D和G12V KRAS的选择性图谱和定量结合相互作用解离常数,这些结果与已发表的数据一致。使用过表达的无细胞系统和内源性蛋白水平的基于细胞的系统,这些检测方法可用于本研究中未描述的其他感兴趣的突变体。