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变形链球菌转运RNA中queuosine水平的环境调控

Environmental Control of Queuosine Levels in Streptococcus mutans tRNAs.

作者信息

Jaroch Marshall, Savage Kathryn, Kuipers Paul, Bacusmo Jo Marie, Hu Jennifer, Sun Jingjing, Dedon Peter C, Rice Kelly C, de Crécy-Lagard Valérie

机构信息

Department of Microbiology and Cell Science, IFAS, University of Florida, Gainesville, Florida, USA.

Department of Biological Engineering, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA.

出版信息

Mol Microbiol. 2025 Jan;123(1):48-59. doi: 10.1111/mmi.15336. Epub 2024 Dec 25.

Abstract

Queuosine (Q) is a modification of the wobble base in tRNAs that decode NA(C/U) codons. It is ubiquitous in bacteria, including many pathogens. Streptococcus mutans is an early colonizer of dental plaque biofilm and a key player in dental caries. Using a combination of genetic and physiological approaches, the predicted Q synthesis and salvage pathways were validated in this organism. These experiments confirmed that S. mutans can synthesize Q de novo through similar pathways found in Bacillus subtilis and Escherichia coli. However, S. mutans has a distinct salvage pathway compared to these model organisms, as it uses a transporter belonging to the energy coupling factor (ECF) family controlled by a preQ-dependent riboswitch. Furthermore, Q levels in this oral pathogen depended heavily on the media composition, suggesting that micronutrients can affect Q-mediated translation efficiency.

摘要

Queuosine (Q) is a modification of the wobble base in tRNAs that decode NA(C/U) codons. It is ubiquitous in bacteria, including many pathogens. Streptococcus mutans is an early colonizer of dental plaque biofilm and a key player in dental caries. Using a combination of genetic and physiological approaches, the predicted Q synthesis and salvage pathways were validated in this organism. These experiments confirmed that S. mutans can synthesize Q de novo through similar pathways found in Bacillus subtilis and Escherichia coli. However, S. mutans has a distinct salvage pathway compared to these model organisms, as it uses a transporter belonging to the energy coupling factor (ECF) family controlled by a preQ-dependent riboswitch. Furthermore, Q levels in this oral pathogen depended heavily on the media composition, suggesting that micronutrients can affect Q-mediated translation efficiency.

Queuosine(Q)是转运RNA中摆动碱基的一种修饰,可解码NA(C/U)密码子。它在包括许多病原体在内的细菌中普遍存在。变形链球菌是牙菌斑生物膜的早期定植菌,也是龋齿的关键因素。通过结合遗传和生理学方法,在该生物体中验证了预测的Q合成和补救途径。这些实验证实,变形链球菌可以通过与枯草芽孢杆菌和大肠杆菌中发现的类似途径从头合成Q。然而,与这些模式生物相比,变形链球菌具有独特的补救途径,因为它使用一种属于能量偶联因子(ECF)家族的转运蛋白,该转运蛋白由一个依赖preQ的核糖开关控制。此外,这种口腔病原体中的Q水平在很大程度上取决于培养基成分,这表明微量营养素会影响Q介导的翻译效率。

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Discovery of novel bacterial queuine salvage enzymes and pathways in human pathogens.发现人类病原体中新的细菌 Queuine 回收酶和途径。
Proc Natl Acad Sci U S A. 2019 Sep 17;116(38):19126-19135. doi: 10.1073/pnas.1909604116. Epub 2019 Sep 3.

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