Oliveira Roster Kirstin, Martinelli Tiago, Connaughton Colm, Santillana Mauricio, Rodrigues Francisco A
Institute of Mathematics and Computer Science, University of São Paulo, São Carlos, SP, Brazil.
Mathematics Institute, University of Warwick, Coventry, United Kingdom.
PLoS Negl Trop Dis. 2024 Dec 26;18(12):e0012726. doi: 10.1371/journal.pntd.0012726. eCollection 2024 Dec.
Measures to curb the spread of SARS-CoV-2 impacted not only COVID-19 dynamics, but also other infectious diseases, such as dengue in Brazil. The COVID-19 pandemic disrupted not only transmission dynamics due to changes in mobility patterns, but also several aspects of surveillance, such as care seeking behavior and clinical capacity. However, we lack a clear understanding of the overall impact on dengue in different parts of Brazil and the contribution of individual causal drivers. In this study, we estimated the gap between expected and observed dengue cases in each Brazilian state from March to April 2020 using an interrupted time series design with forecasts from machine learning models. We then decomposed the gap into the contributions of pandemic-induced changes in disease surveillance and transmission dynamics, using proxies for care availability and care seeking behavior. Of 25 states in the analysis, 19 reported fewer dengue cases than predicted and the gap between expected and observed cases was largely explained by excess under-reporting, as illustrated by a reduction in observed cases below expected levels in early March 2020 in several states. A notable exception is the experience in the Southern states, which reported unusually large dengue outbreaks in 2020. These estimates of dengue case counts adjusted for under-reporting help mitigate some of the data gaps from 2020. Reliable estimates of changes in the disease burden are critical for anticipating future outbreaks.
遏制新冠病毒传播的措施不仅影响了新冠肺炎的动态,还影响了其他传染病,比如巴西的登革热。新冠疫情不仅因流动模式的变化扰乱了传播动态,还影响了监测的多个方面,如就医行为和临床能力。然而,我们尚不清楚其对巴西不同地区登革热的总体影响以及各个因果驱动因素的作用。在本研究中,我们采用中断时间序列设计并结合机器学习模型的预测,估算了2020年3月至4月巴西各州预期登革热病例数与实际观察到的病例数之间的差距。然后,我们使用医疗可及性和就医行为的代理指标,将这一差距分解为疫情导致的疾病监测和传播动态变化的贡献。在分析的25个州中,有19个州报告的登革热病例数少于预测值,预期病例数与实际观察到的病例数之间的差距主要是由于报告不足过多造成的,如2020年3月初几个州实际观察到的病例数低于预期水平所示。一个显著的例外是南部各州的情况,这些州在2020年报告了异常大规模的登革热疫情。这些针对报告不足进行调整的登革热病例数估计有助于弥补2020年的一些数据缺口。对疾病负担变化的可靠估计对于预测未来疫情至关重要。