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ERCPMP:一个用于结直肠息肉形态学和病理学的内镜图像与视频数据集。

ERCPMP: an endoscopic image and video dataset for colorectal polyps morphology and pathology.

作者信息

Forootan Mojgan, Rajabnia Mohsen, Mafi Ahmad R, Tehrani Hamed Azhdari, Ghadirzadeh Erfan, Setayeshfar Mahziar, Ghaffari Zahra, Tashakoripour Mohammad, Zali Mohammad Reza, Bolhasani Hamidreza

机构信息

Gastroenterology and Liver Disease Research Center, Research Institute for Gastroenterology and Liver Diseases, Shahid Beheshti University of Medical Sciences, Tehran, Iran.

Alborz University of Medical Sciences, Alborz, Iran.

出版信息

BMC Res Notes. 2024 Dec 28;17(1):393. doi: 10.1186/s13104-024-07062-6.

DOI:10.1186/s13104-024-07062-6
PMID:39732672
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11682631/
Abstract

This dataset contains demographic, morphological and pathological data, endoscopic images and videos of 191 patients with colorectal polyps. Morphological data is included based on the latest international gastroenterology classification references such as Paris, Pit and JNET classification. Pathological data includes the diagnosis of the polyps including Tubular, Villous, Tubulovillous, Hyperplastic, Serrated, Inflammatory and Adenocarcinoma with Dysplasia Grade & Differentiation.Objectives: Today the most important challenge of developing accurate algorithms for medical prediction, detection, diagnosis, treatment and prognosis is data. ERCPMP is an Endoscopic Image and Video Dataset for Recognition of Colorectal Polyps Morphology and Pathology. This dataset can be used for developing deep learning algorithms for polyps detection, classification, and segmentation.Data description: Images were captured with Olympus colonoscope and are presented in RGB format, JPG type with the resolution of 368 * 256 pixels and 96 dpi. The name of each file (image or video) includes pathological diagnosis, grade and JNet classification of the related polyp.

摘要

该数据集包含191例大肠息肉患者的人口统计学、形态学和病理学数据、内镜图像及视频。形态学数据是依据最新的国际胃肠病学分类参考文献(如巴黎分类、皮氏分类和日本消化内镜学会分类)收录的。病理学数据包括息肉的诊断结果,如管状、绒毛状、管状绒毛状、增生性、锯齿状、炎性以及伴有发育异常分级和分化的腺癌。目标:如今,为医学预测、检测、诊断、治疗及预后开发精确算法面临的最重要挑战是数据。ERCPMP是一个用于识别大肠息肉形态学和病理学的内镜图像及视频数据集。该数据集可用于开发针对息肉检测、分类及分割的深度学习算法。数据描述:图像由奥林巴斯结肠镜采集,以RGB格式呈现,为JPG类型,分辨率为368×256像素,96 dpi。每个文件(图像或视频)的名称包含相关息肉的病理诊断、分级及日本消化内镜学会分类。

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本文引用的文献

1
Artificial intelligence for the early detection of colorectal cancer: A comprehensive review of its advantages and misconceptions.人工智能在结直肠癌早期检测中的应用:优势与误区的综合评述。
World J Gastroenterol. 2021 Oct 14;27(38):6399-6414. doi: 10.3748/wjg.v27.i38.6399.
2
A Review of Colorectal Cancer in Terms of Epidemiology, Risk Factors, Development, Symptoms and Diagnosis.关于结直肠癌的流行病学、危险因素、发展、症状及诊断的综述
Cancers (Basel). 2021 Apr 22;13(9):2025. doi: 10.3390/cancers13092025.
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Global Cancer Statistics 2020: GLOBOCAN Estimates of Incidence and Mortality Worldwide for 36 Cancers in 185 Countries.《全球癌症统计数据 2020:全球 185 个国家和地区 36 种癌症的发病率和死亡率估计》。
CA Cancer J Clin. 2021 May;71(3):209-249. doi: 10.3322/caac.21660. Epub 2021 Feb 4.
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New artificial intelligence system: first validation study versus experienced endoscopists for colorectal polyp detection.新型人工智能系统:与经验丰富的内镜医师在结直肠息肉检测方面的首次验证研究。
Gut. 2020 May;69(5):799-800. doi: 10.1136/gutjnl-2019-319914. Epub 2019 Oct 15.
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Strategies for Colorectal Cancer Screening.结直肠癌筛查策略。
Gastroenterology. 2020 Jan;158(2):418-432. doi: 10.1053/j.gastro.2019.06.043. Epub 2019 Aug 5.
6
Adherence to the World Cancer Research Fund/American Institute for Cancer Research 2018 Recommendations for Cancer Prevention and Risk of Colorectal Cancer.遵循世界癌症研究基金会/美国癌症研究所 2018 年癌症预防和结直肠癌风险的建议。
Cancer Epidemiol Biomarkers Prev. 2019 Sep;28(9):1469-1479. doi: 10.1158/1055-9965.EPI-19-0165. Epub 2019 Jun 24.
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Development and validation of a deep-learning algorithm for the detection of polyps during colonoscopy.开发和验证一种用于结肠镜检查中息肉检测的深度学习算法。
Nat Biomed Eng. 2018 Oct;2(10):741-748. doi: 10.1038/s41551-018-0301-3. Epub 2018 Oct 10.