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息肉大小:用于人工智能驱动的息肉大小测量的精确内镜数据集。

Polyp-Size: A Precise Endoscopic Dataset for AI-Driven Polyp Sizing.

作者信息

Song Yiming, Du Sijia, Wang Ruilan, Liu Fei, Lin Xiaolu, Chen Jinnan, Li Zeyu, Li Zhao, Yang Liuyi, Zhang Zhengjie, Yan Hao, Zhang Qingwei, Qian Dahong, Li Xiaobo

机构信息

Division of Gastroenterology and Hepatology, Shanghai Institute of Digestive Disease, NHC Key Laboratory of Digestive Diseases, Renji Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China.

School of Biomedical Engineering, Shanghai Jiao Tong University, Shanghai, China.

出版信息

Sci Data. 2025 May 31;12(1):918. doi: 10.1038/s41597-025-05251-x.

DOI:10.1038/s41597-025-05251-x
PMID:40450075
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12126491/
Abstract

Colorectal cancer often arises from precancerous polyps, where accurate size assessment is vital for clinical decisions but challenged by subjective methods. While artificial intelligence (AI) has shown promise in improving the accuracy of polyp size estimation, its development depends on large, meticulously annotated datasets. We present Polyp-Size, a dataset of 42 high-resolution white-light colonoscopy videos with polyp sizes precisely measured post-resection using vernier calipers to submillimeter precision. Unlike existing datasets primarily focused on polyp detection or segmentation, Polyp-Size offers validated size annotations, diverse polyp features (Paris classification, anatomical location and histological type), and standardized video formats, enabling robust AI models for size estimation. By making this resource publicly available, we aim to foster research collaboration and innovation in automated polyp measurement to ultimately improve clinical practice.

摘要

结直肠癌通常起源于癌前息肉,准确的大小评估对于临床决策至关重要,但主观方法对此提出了挑战。虽然人工智能(AI)在提高息肉大小估计的准确性方面已显示出前景,但其发展依赖于大量精心注释的数据集。我们展示了Polyp-Size,这是一个包含42个高分辨率白光结肠镜检查视频的数据集,息肉大小在切除后使用游标卡尺精确测量至亚毫米精度。与现有主要专注于息肉检测或分割的数据集不同,Polyp-Size提供了经过验证的大小注释、多样的息肉特征(巴黎分类、解剖位置和组织学类型)以及标准化的视频格式,从而能够构建用于大小估计的强大AI模型。通过公开提供此资源,我们旨在促进自动息肉测量方面的研究合作与创新,以最终改善临床实践。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/af31/12126491/332f1f7701a3/41597_2025_5251_Fig8_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/af31/12126491/521b53e101f2/41597_2025_5251_Fig1_HTML.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/af31/12126491/4f004fa6910c/41597_2025_5251_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/af31/12126491/1334a8893ebc/41597_2025_5251_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/af31/12126491/79848faaadb7/41597_2025_5251_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/af31/12126491/1073822bda5b/41597_2025_5251_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/af31/12126491/332f1f7701a3/41597_2025_5251_Fig8_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/af31/12126491/521b53e101f2/41597_2025_5251_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/af31/12126491/48b3e13cbda1/41597_2025_5251_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/af31/12126491/583fe0445daa/41597_2025_5251_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/af31/12126491/4f004fa6910c/41597_2025_5251_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/af31/12126491/1334a8893ebc/41597_2025_5251_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/af31/12126491/79848faaadb7/41597_2025_5251_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/af31/12126491/1073822bda5b/41597_2025_5251_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/af31/12126491/332f1f7701a3/41597_2025_5251_Fig8_HTML.jpg

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本文引用的文献

1
Prompt-based polyp segmentation during endoscopy.基于提示的内镜检查中的息肉分割
Med Image Anal. 2025 May;102:103510. doi: 10.1016/j.media.2025.103510. Epub 2025 Feb 28.
2
Accuracy of Visual Estimation for Measuring Colonic Polyp Size: A Systematic Review and Meta-Analysis.视觉估计测量结肠息肉大小的准确性:一项系统评价和荟萃分析。
Am J Gastroenterol. 2025 Feb 28. doi: 10.14309/ajg.0000000000003391.
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ERCPMP: an endoscopic image and video dataset for colorectal polyps morphology and pathology.ERCPMP:一个用于结直肠息肉形态学和病理学的内镜图像与视频数据集。
BMC Res Notes. 2024 Dec 28;17(1):393. doi: 10.1186/s13104-024-07062-6.
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A complete benchmark for polyp detection, segmentation and classification in colonoscopy images.结肠镜检查图像中息肉检测、分割和分类的完整基准。
Front Oncol. 2024 Sep 24;14:1417862. doi: 10.3389/fonc.2024.1417862. eCollection 2024.
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[Standardized diagnosis and treatment of colorectal polyps].[结直肠息肉的标准化诊断与治疗]
Zhonghua Wei Chang Wai Ke Za Zhi. 2024 Jun 25;27(6):583-590. doi: 10.3760/cma.j.cn441530-20240416-00143.
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REAL-Colon: A dataset for developing real-world AI applications in colonoscopy.REAL-Colon:用于开发结肠镜检查中真实世界 AI 应用的数据集。
Sci Data. 2024 May 25;11(1):539. doi: 10.1038/s41597-024-03359-0.
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AGA Clinical Practice Update on Appropriate and Tailored Polypectomy: Expert Review.美国胃肠病学会关于适当和个体化息肉切除术的临床实践更新:专家综述
Clin Gastroenterol Hepatol. 2024 Mar;22(3):470-479.e5. doi: 10.1016/j.cgh.2023.10.012. Epub 2023 Nov 28.
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A real-time deep learning-based system for colorectal polyp size estimation by white-light endoscopy: development and multicenter prospective validation.基于实时深度学习的白光内镜下结直肠息肉大小估计系统:开发和多中心前瞻性验证。
Endoscopy. 2024 Apr;56(4):260-270. doi: 10.1055/a-2189-7036. Epub 2023 Oct 12.
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Endomapper dataset of complete calibrated endoscopy procedures.内镜手术完整配准数据集。
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Direct comparison of multiple computer-aided polyp detection systems.多种计算机辅助息肉检测系统的直接比较。
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