Zhang Hanyi, Ouyang Zhen, Zhou Tianji, Su Feng, Wang Mi
Department of Dermatology, Hunan Key Laboratory of Skin Cancer and Psoriasis, Hunan Engineering Research Center of Skin Health and Disease, Xiangya Clinical Research Center for Cancer Immunotherapy, Xiangya Hospital, Central South University, 87 Xiangya Road, Changsha, Hunan, China.
National Engineering Research Center of Personalized Diagnostic and Therapeutic Technology, 87 Xiangya Road, Changsha, Hunan, China.
Sci Rep. 2024 Dec 28;14(1):31314. doi: 10.1038/s41598-024-82655-6.
Aortic dissection (AD) is one of the most dangerous diseases of the cardiovascular system, which is characterized by acute onset and poor prognosis, while the pathogenesis of AD is still unclear and may affect or even delay the diagnosis of AD. Anchorage-dependent cell death (Anoikis) is a special mode of cell death, which is programmed cell death caused by normal cells after detachment from extracellular matrix (ECM) and has been widely studied in the field of oncology in recent years. In this study, we applied bioinformatics analysis, according to the results of research analysis and Gene Ontology (GO), as well as Kyoto Encyclopedia of Genes and Genomes (KEGG), finally found 3 anoikis-related genes (ARGs) based on machine learning. Among these, TP53 and TUBB3 were further verified by receiver operating characteristic (ROC), gene set enrichment analysis (GSEA), gene set variation analysis (GSVA)and other methods. We hypothesize ARGs may be involved in the pathogenesis of AD through pathways such as oxidative stress, inflammatory response, and ECM. Therefore, we conclude that these ARGs can be potential factors in determining the diagnosis of AD.
主动脉夹层(AD)是心血管系统最危险的疾病之一,其特点是起病急、预后差,而AD的发病机制仍不清楚,可能影响甚至延误AD的诊断。失巢凋亡(Anoikis)是一种特殊的细胞死亡模式,是正常细胞脱离细胞外基质(ECM)后发生的程序性细胞死亡,近年来在肿瘤学领域得到了广泛研究。在本研究中,我们应用生物信息学分析,根据研究分析结果以及基因本体论(GO)和京都基因与基因组百科全书(KEGG),最终基于机器学习发现了3个失巢凋亡相关基因(ARG)。其中,TP53和TUBB3通过受试者工作特征(ROC)、基因集富集分析(GSEA)、基因集变异分析(GSVA)等方法进一步验证。我们假设ARG可能通过氧化应激、炎症反应和ECM等途径参与AD的发病机制。因此,我们得出结论,这些ARG可能是决定AD诊断的潜在因素。