Yuan Hao, Liu Baoxia, Zhang Guwen, Feng Zhijuan, Wang Bin, Bu Yuanpeng, Xu Yu, Gong Yaming, Sun Zhihong, Liu Na
College of Horticulture Science, Zhejiang A & F University, Hangzhou, China.
State Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agro-Products, Ministry of Agriculture and Rural Affairs Key Laboratory of Vegetable Legumes Germplasm Enhancement and Molecular Breeding in Southern China, Institute of Vegetables, Zhejiang Academy of Agricultural Sciences, Hangzhou, China.
Front Genet. 2024 Dec 18;15:1510864. doi: 10.3389/fgene.2024.1510864. eCollection 2024.
Peas ( L.) serve as a vital model for plant development and stress research. The () gene family, encoding essential motor proteins, remains understudied in peas. Our research conducted a comprehensive genomic analysis of the genes in peas, identifying 105 genes categorized into seven subfamilies based on evolutionary relationships, gene structures, conserved motifs, and interaction networks. A comparative analysis with and gene families showed a non-uniform distribution of genes across subfamilies. Homology analysis revealed that the family has undergone segmental duplication and is under negative selection pressures, with conserved genes on chromosomes Ps5, Ps6, and Ps7 playing a significant role in pea evolution. Transcriptomics revealed 38 genes with distinct tissue-specific expression, with , , , and showing significant levels in roots, lateral roots, stems, petals, and seeds, respectively. Differential expression under drought and saline stress was observed, with , , upregulated under drought, and and under saline stress. These genes are potential candidates for improving plant stress tolerance. This study offers insights into the pea gene family, highlighting their potential in enhancing plant stress tolerance and setting a stage for future research.
豌豆(L.)是植物发育和胁迫研究的重要模式植物。编码必需运动蛋白的()基因家族在豌豆中仍未得到充分研究。我们的研究对豌豆中的基因进行了全面的基因组分析,根据进化关系、基因结构、保守基序和相互作用网络,鉴定出105个基因,分为七个亚家族。与和基因家族的比较分析表明,基因在亚家族中的分布不均匀。同源性分析表明,该家族经历了片段重复,并且处于负选择压力下,位于染色体Ps5、Ps6和Ps7上的保守基因在豌豆进化中起重要作用。转录组学显示38个基因具有明显的组织特异性表达,其中、、、和分别在根、侧根、茎、花瓣和种子中表现出显著水平。观察到在干旱和盐胁迫下的差异表达,其中、、在干旱下上调,而和在盐胁迫下上调。这些基因是提高植物胁迫耐受性的潜在候选基因。本研究为豌豆基因家族提供了见解,突出了它们在增强植物胁迫耐受性方面的潜力,并为未来的研究奠定了基础。