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印度企业基因组筛查(CoGsI)确定了印度年轻专业人员中与2型糖尿病相关的基因变异。

Corporate genome screening India (CoGsI) identified genetic variants association with T2D in young Indian professionals.

作者信息

Husami Shah Fahad, Kaur Tavleen, Gupta Love, Rastogi Garima, Singh Lakhvinder, Meena Pooja, Sharma Indu, Singh Hemender, Sharma Varun

机构信息

Unlock Wellness Pvt. Ltd., New Delhi, 110025, India.

NMC Genetics India Pvt. Ltd., Gurugram, Haryana, 122001, India.

出版信息

Sci Rep. 2025 Jan 2;15(1):506. doi: 10.1038/s41598-024-84160-2.

DOI:10.1038/s41598-024-84160-2
PMID:39747296
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11697386/
Abstract

Rising cases of type 2 diabetes (T2D) in India, especially in metropolitan cities is an increasing concern. The individuals that were most affected are young professionals working in the corporate sector. However, the corporate sector has remained the least explored for T2D risk predisposition. Considering corporate employees' lifestyles and the role of gene-environment interaction in T2D susceptibility, the study aims to find genetic variants associated with T2D predisposition. In this first kind of study, 680 young professionals (284 T2D cases, and 396 controls) were diagnosed and screened for 2658 variants on an array designed explicitly for the CoGsI study. The variant filtering was done at Bonferroni p-value of 0.000028. The genetic data was analysed using PLINK v1.09, SPSS, R programming, VEP tool, and FUMA GWAS tool. Interestingly, 42 variants were associated with the T2D risk. Out of 42, three missense variants (rs1402467, rs6050, and rs713598) in Sulfotransferase family 1 C member 4 (SULT1C4), Fibrinogen Alpha Chain (FGA), and Taste 2 Receptor Member 38 (TAS2R38) and two untranslated region (UTR) variants (rs1063320 and rs6296) in Major Histocompatibility Complex, Class I, G (HLA-G) and 5-Hydroxytryptamine Receptor 1B (HTR1B) were associated with the T2D risk. CoGsI identified potential genomic markers increasing susceptibility to the early onset of T2D. Present findings provide insights into mechanisms underlying T2D manifestation in corporate professionals due to genetics interacting with occupational stress and urban lifestyles.

摘要

印度2型糖尿病(T2D)病例不断增加,尤其是在大城市,这一情况日益受到关注。受影响最严重的人群是在企业部门工作的年轻专业人士。然而,企业部门仍是T2D风险易感性研究最少的领域。考虑到企业员工的生活方式以及基因 - 环境相互作用在T2D易感性中的作用,本研究旨在寻找与T2D易感性相关的基因变异。在这类首次研究中,680名年轻专业人士(284例T2D患者和396名对照)在专门为CoGsI研究设计的阵列上被诊断并筛查了2658个变异。变异筛选的Bonferroni p值为0.000028。使用PLINK v1.09、SPSS、R编程、VEP工具和FUMA GWAS工具对基因数据进行了分析。有趣的是,42个变异与T2D风险相关。在这42个变异中,硫酸转移酶家族1 C成员4(SULT1C4)、纤维蛋白原α链(FGA)和味觉2受体成员38(TAS2R38)中的三个错义变异(rs1402467、rs6050和rs713598)以及主要组织相容性复合体I类G(HLA - G)和5 - 羟色胺受体1B(HTR1B)中的两个非翻译区(UTR)变异(rs1063320和rs6296)与T2D风险相关。CoGsI确定了增加T2D早发易感性的潜在基因组标记。目前的研究结果为基因与职业压力和城市生活方式相互作用导致企业专业人士T2D表现的潜在机制提供了见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ab87/11697386/a4e6574412f5/41598_2024_84160_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ab87/11697386/ea47224d0328/41598_2024_84160_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ab87/11697386/4ab9b5710695/41598_2024_84160_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ab87/11697386/64601da51818/41598_2024_84160_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ab87/11697386/a4e6574412f5/41598_2024_84160_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ab87/11697386/ea47224d0328/41598_2024_84160_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ab87/11697386/4ab9b5710695/41598_2024_84160_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ab87/11697386/64601da51818/41598_2024_84160_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ab87/11697386/a4e6574412f5/41598_2024_84160_Fig4_HTML.jpg

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