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基因组中杂合性缺失事件的动态变化。

The dynamics of loss of heterozygosity events in genomes.

作者信息

Dutta Abhishek, Schacherer Joseph

机构信息

Université de Strasbourg, CNRS, GMGM UMR 7156, Strasbourg, France.

Institut Universitaire de France (IUF), Paris, France.

出版信息

EMBO Rep. 2025 Feb;26(3):602-612. doi: 10.1038/s44319-024-00353-w. Epub 2025 Jan 2.

Abstract

Genomic instability is a hallmark of tumorigenesis, yet it also plays an essential role in evolution. Large-scale population genomics studies have highlighted the importance of loss of heterozygosity (LOH) events, which have long been overlooked in the context of genetic diversity and instability. Among various types of genomic mutations, LOH events are the most common and affect a larger portion of the genome. They typically arise from recombination-mediated repair of double-strand breaks (DSBs) or from lesions that are processed into DSBs. LOH events are critical drivers of genetic diversity, enabling rapid phenotypic variation and contributing to tumorigenesis. Understanding the accumulation of LOH, along with its underlying mechanisms, distribution, and phenotypic consequences, is therefore crucial. In this review, we explore the spectrum of LOH events, their mechanisms, and their impact on fitness and phenotype, drawing insights from Saccharomyces cerevisiae to cancer. We also emphasize the role of LOH in genomic instability, disease, and genome evolution.

摘要

基因组不稳定性是肿瘤发生的一个标志,但它在进化中也起着至关重要的作用。大规模群体基因组学研究突出了杂合性缺失(LOH)事件的重要性,而在遗传多样性和不稳定性的背景下,这些事件长期以来一直被忽视。在各种类型的基因组突变中,LOH事件最为常见,且影响基因组的更大比例。它们通常源于双链断裂(DSB)的重组介导修复,或源于被加工成DSB的损伤。LOH事件是遗传多样性的关键驱动因素,能够实现快速的表型变异并促进肿瘤发生。因此,了解LOH的积累及其潜在机制、分布和表型后果至关重要。在这篇综述中,我们从酿酒酵母到癌症,探讨了LOH事件的范围、其机制以及它们对适应性和表型的影响。我们还强调了LOH在基因组不稳定性、疾病和基因组进化中的作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/09c3/11811284/c84913e96e00/44319_2024_353_Fig1_HTML.jpg

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