Fowler Colin E, O'Hearn Natalie A, Salus Griffin J, Singh Arundeep, Boutz Paul L, Lees Jacqueline A
The David H. Koch Institute for Integrative Cancer Research, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.
Department of Biology, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.
bioRxiv. 2024 Dec 20:2024.12.17.628905. doi: 10.1101/2024.12.17.628905.
Protein arginine methyltransferase 5 (PRMT5) is a promising cancer target, yet it's unclear which PRMT5 roles underlie this vulnerability. Here, we establish that PRMT5 inhibition induces a special class of unspliced introns, called detained introns (DIs). To interrogate the impact of DIs, we depleted CLNS1A, a PRMT5 cofactor that specifically enables Sm protein methylation. We found that many, but not all, cell lines are CLNS1A-dependent and established that loss of viability is linked to loss of Sm protein methylation and DI upregulation. Finally, we discovered that PRMT5-regulated DIs, and the impacted genes, are highly conserved across human, and also mouse, cell lines but display little interspecies conservation. Despite this, human and mouse DIs have convergent impacts on proliferation by affecting essential components of proliferation-regulating complexes. Together, these data argue that the PRMT5-splicing axis, including appropriate DI splicing, underlies cancer's vulnerability to PRMT5 inhibitors.
蛋白质精氨酸甲基转移酶5(PRMT5)是一个很有前景的癌症靶点,但尚不清楚PRMT5的哪些作用构成了这种易感性的基础。在此,我们证实PRMT5抑制会诱导一类特殊的未剪接内含子,称为滞留内含子(DI)。为了探究DI的影响,我们敲低了CLNS1A,这是一种PRMT5辅因子,它能特异性地使Sm蛋白发生甲基化。我们发现,许多(但并非所有)细胞系都依赖CLNS1A,并证实细胞活力的丧失与Sm蛋白甲基化的丧失以及DI上调有关。最后,我们发现PRMT5调控的DI以及受影响的基因在人类细胞系和小鼠细胞系中高度保守,但种间保守性较低。尽管如此,人类和小鼠的DI通过影响增殖调节复合物的关键成分,对增殖具有趋同影响。总之,这些数据表明,PRMT5剪接轴,包括适当的DI剪接,是癌症对PRMT5抑制剂易感性的基础。