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从RNA测序挖掘的绵羊基因:鉴定、表达谱、对前体脂肪细胞分化的促进作用、启动子活性及其与表型性状相关的多态性

Ovine Mined from RNA-Seq: Identification, Expression Profile, Promotion of Preadipocyte Differentiation, Promoter Activity, and Its Polymorphisms Related to Phenotypic Traits.

作者信息

Xu Hongwei, Luo Yunyun, Zhang Mengyang, Pan Chuanying, Lan Xianyong, Zheng Juanshan

机构信息

College of Life Science and Engineering, Northwest Minzu University, Lanzhou 730030, China.

College of Animal Science and Technology, Northwest A&F University, Yangling 712100, China.

出版信息

Animals (Basel). 2024 Dec 16;14(24):3631. doi: 10.3390/ani14243631.

Abstract

Tail fat is essential for sheep survival in extreme environments, yet its significance is often overlooked, leading to the decline of fat-tailed breeds. This study identified a novel lncRNA, (), through transcriptome sequencing, showing differential expression in the tail adipose tissues of Lanzhou Fat-Tailed (LFT) sheep and Tibetan (TS) sheep. Highly expressed in adipose tissues, inhibits preadipocyte proliferation and promotes 3T3-L1 differentiation, suggesting its role in regulating fat deposition. Located in both the cytoplasm and nucleus, targets the neighboring gene and may function as a molecular sponge for conserved miRNAs, including oar-miR-30a-3p, , and , which are known to influence fat and muscle-related physiological processes. Moreover, the core promoter of (-2607 bp to -1776 bp) harbors four SNPs (g.-2429G>A, g.-2030T>C, g.-2016C>T, g.-2015G>A) significantly associated with growth traits such as body height in Guiqian Semi-Fine Wool (GSFW) sheep. These findings suggest plays a key role in fat deposition and growth regulation, offering new insights into the molecular mechanisms of lncRNAs in sheep. It provides a potential target for genetic improvement and molecular breeding to enhance fat deposition and adaptability in sheep breeds.

摘要

尾脂对绵羊在极端环境中的生存至关重要,但其重要性常常被忽视,导致脂尾品种数量减少。本研究通过转录组测序鉴定出一种新型lncRNA,(),其在兰州脂尾(LFT)羊和藏羊(TS)羊的尾部脂肪组织中表达存在差异。在脂肪组织中高表达,抑制前脂肪细胞增殖并促进3T3-L1分化,表明其在调节脂肪沉积中发挥作用。位于细胞质和细胞核中,靶向邻近基因,并可能作为保守miRNA的分子海绵发挥作用,这些miRNA包括已知影响脂肪和肌肉相关生理过程的oar-miR-30a-3p、()和()。此外,()的核心启动子(-2607 bp至-1776 bp)含有四个与贵干半细毛(GSFW)羊的生长性状如体高显著相关的单核苷酸多态性(g.-2429G>A、g.-2030T>C、g.-2016C>T、g.-2015G>A)。这些发现表明()在脂肪沉积和生长调节中起关键作用,为lncRNAs在绵羊中的分子机制提供了新的见解。它为提高绵羊品种的脂肪沉积和适应性的遗传改良和分子育种提供了潜在靶点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c017/11672851/fd3e01cad4de/animals-14-03631-g001.jpg

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