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鉴定与阿尔茨海默病相关的枢纽基因和微小RNA:通往新型治疗策略的生物信息学途径

Identifying Hub Genes and miRNAs Associated with Alzheimer's Disease: A Bioinformatics Pathway to Novel Therapeutic Strategies.

作者信息

Gascón Elisa, Calvo Ana Cristina, Molina Nora, Zaragoza Pilar, Osta Rosario

机构信息

Department of Anatomy, Embryology and Animal Genetics, University of Zaragoza, 50013 Zaragoza, Spain.

Centro de Investigación Biomédica en Red de Enfermedades Neurodegenerativas (CIBERNED), Av. Monforte de Lemos 3-5, 28029 Madrid, Spain.

出版信息

Biomolecules. 2024 Dec 20;14(12):1641. doi: 10.3390/biom14121641.

Abstract

Alzheimer's disease (AD) is a neurodegenerative disorder that mainly affects the elderly population. It is characterized by cognitive impairment and dementia due to abnormal levels of amyloid beta peptide (Aβ) and axonal Tau protein in the brain. However, the complex underlying mechanisms affecting this disease are not yet known, and there is a lack of standardized biomarkers and therapeutic targets. Therefore, in this study, by means of bioinformatics analysis, AD-affected brain tissue was analyzed using the GSE138260 dataset, identifying 612 differentially expressed genes (DEGs). Functional analysis revealed 388 upregulated DEGs associated with sensory perception and 224 downregulated DEGs linked to the regulation and modulation of synaptic processes. Protein-protein interaction network analysis identified 20 hub genes. Furthermore, miRNA target gene networks revealed 1767 miRNAs linked to hub genes, among which hsa-mir-106a-5p, hsa-mir-17-5p, hsa-mir-26a-5p, hsa-mir-27a-3p and hsa-mir-34a-5p were the most relevant. This study presents novel biomarkers and therapeutic targets for AD by analyzing the information obtained with a comprehensive literature review, providing new potential targets to study their role in AD.

摘要

阿尔茨海默病(AD)是一种主要影响老年人群的神经退行性疾病。其特征是由于大脑中β-淀粉样肽(Aβ)和轴突 Tau 蛋白水平异常而导致认知障碍和痴呆。然而,影响该疾病的复杂潜在机制尚不清楚,并且缺乏标准化的生物标志物和治疗靶点。因此,在本研究中,通过生物信息学分析,使用 GSE138260 数据集对受 AD 影响的脑组织进行分析,鉴定出 612 个差异表达基因(DEG)。功能分析显示,388 个上调的 DEG 与感觉知觉相关,224 个下调的 DEG 与突触过程的调节有关。蛋白质-蛋白质相互作用网络分析确定了 20 个枢纽基因。此外,miRNA 靶基因网络显示 1767 个 miRNA 与枢纽基因相关,其中 hsa-mir-106a-5p、hsa-mir-17-5p、hsa-mir-26a-5p、hsa-mir-27a-3p 和 hsa-mir-34a-5p 最为相关。本研究通过综合文献综述分析所获得的信息,提出了针对 AD 的新型生物标志物和治疗靶点,为研究它们在 AD 中的作用提供了新的潜在靶点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b01c/11726968/32161016c59b/biomolecules-14-01641-g001.jpg

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