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一种来自微藻从头转录组的强效抗菌肽(P6)

A Potent Antibacterial Peptide (P6) from the De Novo Transcriptome of the Microalga .

作者信息

Zhang Kexin, Yin Xiaoting, Huang Yu, Liu Chao, Zhang Qingchun, Liu Qing, Wang Senyu, Fei Wenwu, Shi Qiong, Qiu Limei

机构信息

School of Marine Biology and Engineering, Qingdao Agricultural University, Qingdao 266109, China.

Key Laboratory of Breeding Biotechnology and Sustainable Aquaculture (CAS), Institute of Oceanology, Chinese Academy of Sciences, Qingdao 266000, China.

出版信息

Int J Mol Sci. 2024 Dec 23;25(24):13736. doi: 10.3390/ijms252413736.

Abstract

Marine microalgae are a rich source of natural products, and their amino acid-based antimicrobial agents are usually obtained by enzymatic hydrolysis, which is inefficient and limits the research on antimicrobial peptides (AMPs) from microalgae. In this study, is used as a model to predict antimicrobial peptides through high-throughput methods, and 471 putative peptides are identified based on the de novo transcriptome technique. Among them, three short peptides, P1, P6, and P7 were found to have antimicrobial activity against , , , and yeast , and they showed no hemolytic activity even at higher concentrations up to 10 mg/mL. Especially P6, a 12-amino acid peptide with three positive charges, which exhibited the most significant microbicidal effect with the lowest MIC of 31.25 μg/mL against , and electron microscope observations showed the surface of P6 treated with granular protrusions and ruptures, suggesting that it likely caused cell death by directly destroying the bacterial cell membrane. This study may enrich the database of microalgal AMPs and demonstrate an efficient process for searching and validating microalgal source AMPs by combining computer analysis with bioactivity experiments.

摘要

海洋微藻是天然产物的丰富来源,其基于氨基酸的抗菌剂通常通过酶水解获得,效率低下且限制了对微藻抗菌肽(AMPs)的研究。在本研究中,以[具体内容缺失]为模型,通过高通量方法预测抗菌肽,并基于从头转录组技术鉴定出471个推定肽。其中,发现三种短肽P1、P6和P7对[具体细菌缺失]、[具体细菌缺失]、[具体细菌缺失]和酵母具有抗菌活性,即使在高达10 mg/mL的较高浓度下也未表现出溶血活性。特别是P6,一种具有三个正电荷的12氨基酸肽,对[具体细菌缺失]表现出最显著的杀菌效果,最低MIC为31.25 μg/mL,电子显微镜观察显示经P6处理的[具体细菌缺失]表面有颗粒状突起和破裂,表明它可能通过直接破坏细菌细胞膜导致细胞死亡。本研究可能会丰富微藻AMPs数据库,并展示一种通过将计算机分析与生物活性实验相结合来搜索和验证微藻来源AMPs的有效方法。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7d07/11676368/b269acc8569d/ijms-25-13736-g001.jpg

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