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富含螺旋的微型蛋白质折叠能量学中C甲基化与C立体化学之间的相互作用。

Interplay between C Methylation and C Stereochemistry in the Folding Energetics of a Helix-Rich Miniprotein.

作者信息

Harmon Thomas W, Lin Yuhan, Sutton Ryen T, Osborne Shane W J, Seth Horne W

机构信息

Department of Chemistry, University of Pittsburgh, Pittsburgh, PA, 15260, USA.

出版信息

Chembiochem. 2025 Mar 15;26(6):e202401022. doi: 10.1002/cbic.202401022. Epub 2025 Jan 24.

Abstract

The α-helix is an abundant and functionally important element of protein secondary structure, which has motivated intensive efforts toward chemical strategies to stabilize helical folds. One such method is the incorporation of non-canonical backbone composition through an additional methyl substituent at the C atom. Examples of monomers include the achiral 2-aminoisobutyric acid (Aib) with geminal dimethyl substitution and chiral analogues with one methyl and one non-methyl substituent. While Aib and chiral C-Me residues are both established helix promoting moieties, their comparative ability in this regard has not been quantitatively investigated. Addressing this gap would help to inform the use of these building blocks in the construction of peptide and protein mimetics as well as provide fundamental insights into consequences of backbone methylation on folding. Here, we report a quantitative comparison of the impacts of Aib and chiral αMe residues on the high-resolution folded structure and folding thermodynamics of a small helical protein. These results reveal a synergistic stabilizing effect arising from the presence of C methylation in conjunction with a C stereocenter.

摘要

α-螺旋是蛋白质二级结构中丰富且功能重要的元件,这促使人们为稳定螺旋折叠的化学策略付出了巨大努力。其中一种方法是通过在碳原子上引入额外的甲基取代基来掺入非规范的主链组成。单体的例子包括具有偕二甲基取代的非手性2-氨基异丁酸(Aib)以及具有一个甲基和一个非甲基取代基的手性类似物。虽然Aib和手性C-甲基残基都是已确定的促进螺旋的部分,但它们在这方面的比较能力尚未得到定量研究。填补这一空白将有助于指导这些构建模块在肽和蛋白质模拟物构建中的使用,并为骨架甲基化对折叠的影响提供基本见解。在此,我们报告了Aib和手性α-甲基残基对小螺旋蛋白的高分辨率折叠结构和折叠热力学影响的定量比较。这些结果揭示了C-甲基化与C-立体中心共同存在所产生的协同稳定作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4d79/11907383/b0e7e8d199bf/CBIC-26-e202401022-g005.jpg

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