构建用于预测非小细胞肺癌预后、免疫微环境和抗肿瘤药物敏感性的新型放射抗性相关特征。

Construction of a novel radioresistance-related signature for prediction of prognosis, immune microenvironment and anti-tumour drug sensitivity in non-small cell lung cancer.

作者信息

Chen Yanliang, Zhou Chan, Zhang Xiaoqiao, Chen Min, Wang Meifang, Zhang Lisha, Chen Yanhui, Huang Litao, Sun Junjun, Wang Dandan, Chen Yong

机构信息

The First School of Clinical Medicine, Lanzhou University, Lanzhou, Gansu, China.

Department of Geriatrics, Taihe Hospital, Hubei University of Medicine, Shiyan, Hubei, China.

出版信息

Ann Med. 2025 Dec;57(1):2447930. doi: 10.1080/07853890.2024.2447930. Epub 2025 Jan 10.

Abstract

BACKGROUND

Non-small cell lung cancer (NSCLC) is a fatal disease, and radioresistance is an important factor leading to treatment failure and disease progression. The objective of this research was to detect radioresistance-related genes (RRRGs) with prognostic value in NSCLC.

METHODS

The weighted gene coexpression network analysis (WGCNA) and differentially expressed genes (DEGs) analysis were performed to identify RRRGs using expression profiles from TCGA and GEO databases. The least absolute shrinkage and selection operator (LASSO) regression and random survival forest (RSF) were used to screen for prognostically relevant RRRGs. Multivariate Cox regression was used to construct a risk score model. Then, Immune landscape and drug sensitivity were evaluated. The biological functions exerted by the key gene were verified by experiments.

RESULTS

Ninety-nine RRRGs were screened by intersecting the results of DEGs and WGCNA, then 11 hub RRRGs associated with survival were identified using machine learning algorithms (LASSO and RSF). Subsequently, an eight-gene ( and ) risk score model was established and demonstrated to be an independent prognostic factor in NSCLC on the basis of Cox regression analysis. The immune landscape and sensitivity to anti-tumour drugs showed significant disparities between patients categorized into different risk score subgroups. experiments indicated that overexpression of enhanced the radiosensitivity of A549 cells, and knockdown reversed the cytotoxicity induced by X-rays.

CONCLUSION

Our study developed an eight-gene risk score model with potential clinical value that can be adopted for choice of drug treatment and prognostic prediction. Its clinical routine use may assist clinicians in selecting more rational practices for individuals, which is important for improving the prognosis of NSCLC patients. These findings also provide references for the development of potential therapeutic targets.

摘要

背景

非小细胞肺癌(NSCLC)是一种致命疾病,放射抗性是导致治疗失败和疾病进展的重要因素。本研究的目的是检测在NSCLC中具有预后价值的放射抗性相关基因(RRRGs)。

方法

使用来自TCGA和GEO数据库的表达谱,进行加权基因共表达网络分析(WGCNA)和差异表达基因(DEGs)分析以鉴定RRRGs。使用最小绝对收缩和选择算子(LASSO)回归和随机生存森林(RSF)筛选与预后相关的RRRGs。使用多变量Cox回归构建风险评分模型。然后,评估免疫景观和药物敏感性。通过实验验证关键基因发挥的生物学功能。

结果

通过交叉DEGs和WGCNA的结果筛选出99个RRRGs,然后使用机器学习算法(LASSO和RSF)鉴定出11个与生存相关的核心RRRGs。随后,建立了一个八基因(和)风险评分模型,并在Cox回归分析的基础上证明其是NSCLC的独立预后因素。不同风险评分亚组的患者在免疫景观和对抗肿瘤药物的敏感性方面存在显著差异。实验表明,的过表达增强了A549细胞的放射敏感性,而敲低则逆转了X射线诱导的细胞毒性。

结论

我们的研究开发了一个具有潜在临床价值的八基因风险评分模型,可用于药物治疗选择和预后预测。其临床常规应用可能有助于临床医生为个体选择更合理的治疗方案,这对改善NSCLC患者的预后很重要。这些发现也为潜在治疗靶点的开发提供了参考。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/70fa/11727174/75632b37ad8e/IANN_A_2447930_F0001_C.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索