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用于通过定量逆转录聚合酶链反应(qRT-PCR)对临床试验进行验证和核查的综合方法框架。

An integrated methodological framework for the validation and verification of clinical testing by qRT-PCR.

作者信息

Cardona-Ramírez Carolina, Enríquez-Valencia Cruz Elena, Méndez-Callejas Gina, Barreto Giovanna Meza, Tafur-Gómez Gabriel Andrés, Sanjuanelo-Corredor Danny Wilson

机构信息

Grupo de Investigaciones Biomédicas y de Genética Humana Aplicada GIBGA, Facultad de Ciencias de la Salud, Universidad de Ciencias Aplicadas y Ambientales U.D.C.A, Bogotá, Colombia.

Grupo de Investigación Ciencia Animal, Facultad de Ciencias Agropecuarias, Universidad de Ciencias Aplicadas y Ambientales U.D.C.A, Bogotá, Colombia.

出版信息

Heliyon. 2024 Dec 15;11(1):e41088. doi: 10.1016/j.heliyon.2024.e41088. eCollection 2025 Jan 15.

Abstract

This paper outlines a practical method for validating quantitative-qualitative techniques used to detect genetic material through qRT-PCR, specifically focusing on SARS-CoV-2 testing and adhering to ISO/IEC 17025:2018 accreditation standards. Despite the prevalence of quantitative-qualitative screening in genetic testing, comprehensive validation guidelines remain a notable gap in the field. Such guidelines could be applied to other molecular testing areas that rely on these techniques, particularly those involving sample handling, automated extraction, and amplification processes, which can significantly impact results. This work describes the statistical approaches behind qRT-PCR protocols, followed by a technical characterization profile of the validation process. Modifications to the gold standard method allowed us to establish a technical limit of detection (LOD) of 5,09 copies/reaction at a 95 % confidence interval.

摘要

本文概述了一种实用方法,用于验证通过定量逆转录聚合酶链反应(qRT-PCR)检测遗传物质所使用的定量-定性技术,特别关注严重急性呼吸综合征冠状病毒2(SARS-CoV-2)检测,并遵循ISO/IEC 17025:2018认可标准。尽管定量-定性筛查在基因检测中很普遍,但全面的验证指南在该领域仍然是一个显著的空白。此类指南可应用于依赖这些技术的其他分子检测领域,特别是那些涉及样本处理、自动提取和扩增过程的领域,这些过程可能会对结果产生重大影响。这项工作描述了qRT-PCR方案背后的统计方法,随后是验证过程的技术特征概况。对金标准方法的修改使我们能够在95%置信区间建立5.09拷贝/反应的技术检测限(LOD)。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5d0a/11721250/c4a6d2b6ada5/gr1.jpg

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