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球形施莱氏菌新种,一种来自山地湿地的嗜中性、降解木聚糖的浮霉菌,以及施莱氏菌属的修订描述。

Schlesneria sphaerica sp. nov., a neutrophilic, xylan-degrading planctomycete from a mountain wetland, and emended description of the genus Schlesneria.

作者信息

Kulichevskaya Irina S, Ivanova Anastasia A, Naumoff Daniil G, Zlatogorskaya Anna A, Kachmazov Gennady S, Dedysh Svetlana N

机构信息

Winogradsky Institute of Microbiology, Research Center of Biotechnology of the Russian Academy of Sciences, Moscow 119071, Russia.

Faculty of Chemistry, Biology and Biotechnology, North Ossetian State University Named after K.L. Khetagurov, Vladikavkaz 362025, Russia.

出版信息

FEMS Microbiol Lett. 2025 Jan 10;372. doi: 10.1093/femsle/fnaf006.

Abstract

Aerobic chemoorganotrophic planctomycetes of the genus Schlesneria colonize a wide spectrum of freshwater ecosystems. The only described species of this genus, S. paludicola, is represented by ellipsoid-shaped, moderately acidophilic bacteria isolated from acidic peat bogs. Here, we characterize a novel neutrophilic member of this genus from a mountain wetland, strain T3-172T. This isolate possesses unpigmented, non-motile, spherical cells, which grow on media containing some mono- and polysaccharides in the pH range of 6.0-7.5 and at temperatures between 15 and 37°C. Good growth is observed on xylan, one of the major plant cell wall biopolymers. The genome of strain T3-172T is 7.16 Mb in size and contains two unlinked sets of rRNA genes, 93 tRNA genes, and about 5500 potential protein-coding genes. Among the latter, the GH5 family protein is identified as the most reliable candidate for the cleavage of xylan. The 16S rRNA gene sequence of strain T3-172T displays 97.8% similarity to that of S. paludicola MPL7T, and the average nucleotide identity between the genomes of these planctomycetes is 71.6%. We, therefore, propose a novel species of the genus Schlesneria, S. sphaerica sp. nov., with strain T3-172T (=KCTC 102306T = VKM B-3856T) as the type strain.

摘要

施莱森纳氏菌属的需氧化能有机营养浮霉菌定殖于广泛的淡水生态系统中。该属唯一已描述的物种沼泽施莱森纳氏菌由从酸性泥炭沼泽中分离出的椭圆形、中度嗜酸细菌代表。在此,我们从一个山地湿地中鉴定出该属的一个新型嗜中性成员,菌株T3-172T。该分离株具有无色素、不运动的球形细胞,在含有一些单糖和多糖的培养基上,于pH值6.0 - 7.5和温度15至37°C下生长。在木聚糖(一种主要的植物细胞壁生物聚合物)上观察到良好生长。菌株T3-172T的基因组大小为7.16 Mb,包含两组不连锁的rRNA基因、93个tRNA基因和约5500个潜在的蛋白质编码基因。在后者中,GH5家族蛋白被鉴定为木聚糖裂解最可靠的候选蛋白。菌株T3-172T的16S rRNA基因序列与沼泽施莱森纳氏菌MPL7T的序列相似度为97.8%,这些浮霉菌基因组之间的平均核苷酸同一性为71.6%。因此,我们提出施莱森纳氏菌属的一个新物种,球形施莱森纳氏菌,新种,以菌株T3-172T(=KCTC 102306T = VKM B-3856T)作为模式菌株。

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